RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 COX4I1P13073 169 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 PTGES3Q15185 160 aaKnown RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 TARBP2Q15633 366 aaKnown RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 EARS2Q5JPH6 523 aaKnown RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 ARCQ7LC44 396 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 GPR135Q8IZ08 494 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 FNIP1Q8TF40 1166 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 DUSP16Q9BY84 665 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 NECTIN3Q9NQS3 549 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 C3orf18Q9UK00 162 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 BTRCQ9Y297 605 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 PSMG1O95456 288 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 SRSF11Q05519 484 aaKnown RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 BROXQ5VW32 411 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 PCDHB9Q9Y5E1 797 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 DYTNA2CJ06 578 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 CBX6O95503 412 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 GABRR2P28476 465 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 GRIA3P42263 894 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 GLUD2P49448 558 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 TBX2Q13207 712 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 PLPP4Q5VZY2 271 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 CDYL2Q8N8U2 506 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 KAZALD1Q96I82 304 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 MKL2Q9ULH7 1088 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 IRF6O14896 467 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 TLR5O60602 858 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 ABHD2P08910 425 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 FAM153BP0C7A2 387 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 TAS2R41P59536 307 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 DGCR6Q14129 220 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 FAM153CQ494X1 144 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 CHADLQ6NUI6 762 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 TCAIMQ8N3R3 496 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 PANX1Q96RD7 426 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 TTPALQ9BTX7 342 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 MRIQ9BWK5 157 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 VWDEQ8N2E2 1590 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 TRIM38O00635 465 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 GOT1P17174 413 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 GPD2P43304 727 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 NEK7Q8TDX7 302 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 KCTD4Q8WVF5 259 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 PHF11Q9UIL8 331 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 DCCP43146 1447 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 PPIDQ08752 370 aaKnown RBP23.17■■□□□ 1.3
NPAS3-201ENST00000346562 FAM151BQ6UXP7 276 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 DEF8Q6ZN54 512 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 LRRC52Q8N7C0 313 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 BPIFB6Q8NFQ5 453 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 IRGMA1A4Y4 181 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 MATKP42679 507 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 CAMK1Q14012 370 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 NDUFA9Q16795 377 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 RBM23Q86U06 439 aaKnown RBP23.17■■□□□ 1.3
NPAS3-201ENST00000346562 FAM35AQ86V20 835 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 TMEM161BQ8NDZ6 487 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 TEFMQ96QE5 360 aaKnown RBP23.17■■□□□ 1.3
NPAS3-201ENST00000346562 AGXT2Q9BYV1 514 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 EXD2Q9NVH0 621 aa23.17■■□□□ 1.3
NPAS3-201ENST00000346562 CYP3A7-CYP3A51PA0A087WV96 503 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 ABHD14A-ACY1A0A1B0GW23 586 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 CYP3A7P24462 503 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 PRKCIP41743 596 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 NAGLUP54802 743 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 PSME3P61289 254 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 LIPMQ5VYY2 423 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 TAPT1Q6NXT6 567 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 KBTBD8Q8NFY9 601 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 OR10H5Q8NGA6 315 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 STK32AQ8WU08 396 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 OMA1Q96E52 524 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 PHPT1Q9NRX4 125 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 RAP2CQ9Y3L5 183 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 ZNF37AP17032 561 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 ADSLP30566 484 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 TTKP33981 857 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 OAFQ86UD1 273 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 NARS2Q96I59 477 aaKnown RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D14Q9P2M4 693 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 FAM198AQ9UFP1 575 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 MAGEB3O15480 346 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 MPPE1Q53F39 396 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 ZFPM1Q8IX07 1006 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 MCEMP1Q8IX19 187 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 RAD51AP1Q96B01 352 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 TOP3BO95985 862 aaKnown RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 SP100P23497 879 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 ADSSP30520 456 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 MEA1Q16626 185 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 PIWIL4Q7Z3Z4 852 aaKnown RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 CDADC1Q9BWV3 514 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 H3BQF6 201 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 IDO1P14902 403 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 ACADLP28330 430 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 CDH5P33151 784 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 TNFSF9P41273 254 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 CAPN13Q6MZZ7 669 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-201ENST00000346562 CRISPLD1Q9H336 500 aa23.16■■□□□ 1.3
NPAS3-201ENST00000346562 DIP2CQ9Y2E4 1556 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms