RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CATSPERZQ9NTU4 200 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 CFAP97Q9P2B7 532 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 TCAF1Q9Y4C2 921 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 KRT87PA6NCN2 255 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 SAC3D1A6NKF1 404 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 MAFKO60675 156 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 TBX10O75333 385 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 GMNNO75496 209 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 PSMG1O95456 288 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 PPP1R8Q12972 351 aaKnown RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 STXBP5Q5T5C0 1151 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 ZC3HC1Q86WB0 502 aaKnown RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 CPNE9Q8IYJ1 553 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 TBCDQ9BTW9 1192 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 ASB8Q9H765 288 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 OLA1Q9NTK5 396 aaKnown RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 SUN2Q9UH99 717 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 PRUNE2Q8WUY3 3088 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 hCG_2014768A0A024R1R8 64 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 FAM149AA5PLN7 773 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 SLC38A8A6NNN8 435 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 DLX3O60479 287 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 ADAMTS4O75173 837 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 HMOX2P30519 316 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 GDF5P43026 501 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 GNA12Q03113 381 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 LRRC74BQ6ZQY2 392 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
CASC4-202ENST00000345795 CALML6Q8TD86 181 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 UCMAQ8WVF2 138 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 SORCS1Q8WY21 1168 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 KCTD13Q8WZ19 329 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.36□□□□□ -0.274e-10■■■■■ 86.3
CASC4-202ENST00000345795 DCLRE1BQ9H816 532 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 FOCADQ5VW36 1801 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 SHROOM3Q8TF72 1996 aa13.36□□□□□ -0.27
CASC4-202ENST00000345795 SYNDIG1LA6NDD5 238 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 UPK3BL1B0FP48 263 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 UPK3BL2E5RIL1 263 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 NBNO60934 754 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PCNAP12004 261 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 COX4I1P13073 169 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 GALNT2Q10471 571 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 FASTKQ14296 549 aaKnown RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 PCBP1Q15365 356 aaKnown RBP eCLIP13.35□□□□□ -0.27
CASC4-202ENST00000345795 CAPRIN2Q6IMN6 1127 aaKnown RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 CMTM8Q8IZV2 173 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 FBXO39Q8N4B4 442 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PDZD8Q8NEN9 1154 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 SLC2A13Q96QE2 648 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 SLC22A12Q96S37 553 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 TUBB6Q9BUF5 446 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.35□□□□□ -0.27
CASC4-202ENST00000345795 IGSF9Q9P2J2 1179 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 SLC7A8Q9UHI5 535 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 LSM7Q9UK45 103 aaKnown RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 SLC45A1Q9Y2W3 748 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 RAI2Q9Y5P3 530 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 INPP4BO15327 924 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 FGF10O15520 208 aaPredicted RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 CHEK2O96017 543 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 GALTP07902 379 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 FGF3P11487 239 aaPredicted RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 GSSP48637 474 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 STK19P49842 368 aaPredicted RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 EPHB3P54753 998 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PFKPQ01813 784 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PAFAH1B3Q15102 231 aaKnown RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 MAP3K21Q5TCX8 1036 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PAQR3Q6TCH7 311 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 BHLHE22Q8NFJ8 381 aaPredicted RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 PYCR2Q96C36 320 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PAWRQ96IZ0 340 aaKnown RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 ARHGEF3Q9NR81 526 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 NMRK1Q9NWW6 199 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 RRN3Q9NYV6 651 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PCDHB8Q9UN66 801 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 TRIOBPQ9H2D6 2365 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 ARVCFO00192 962 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 MGRN1O60291 552 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 SERPIND1P05546 499 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 UGT2B4P06133 528 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 ETS2P15036 469 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 EEF1B2P24534 225 aaKnown RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 DNAL1Q4LDG9 190 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 CES4AQ5XG92 561 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 CENPIQ92674 756 aaPredicted RBP13.35□□□□□ -0.27
CASC4-202ENST00000345795 VAT1Q99536 393 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 LRMDAQ9H2I8 198 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 SAR1AQ9NR31 198 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 PPM1HQ9ULR3 514 aa13.35□□□□□ -0.27
CASC4-202ENST00000345795 KPNA3O00505 521 aaPredicted RBP13.34□□□□□ -0.27
CASC4-202ENST00000345795 GNGT2O14610 69 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 HDAC3O15379 428 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 FKTNO75072 461 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 PGM3O95394 542 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 KCNA5P22460 613 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms