RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 OLFM1Q99784 485 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 C1QTNF1Q9BXJ1 281 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 SPHK2Q9NRA0 654 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 FAM95CA0A1B0GW59 222 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 HGSO14964 777 aaPredicted RBP13.63□□□□□ -0.23
CDC42-202ENST00000344548 GPR39O43194 453 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 S1PR4O95977 384 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 BPGMP07738 259 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 SBK3P0C264 359 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 SRCP12931 536 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 CTPS1P17812 591 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 DDX6P26196 483 aaKnown RBP eCLIP13.63□□□□□ -0.232e-18■■■■■ 30
CDC42-202ENST00000344548 ARRB2P32121 409 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 SERPINB8P50452 374 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 ZNF140P52738 457 aaPredicted RBP13.63□□□□□ -0.23
CDC42-202ENST00000344548 DLG1Q12959 904 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 USP4Q13107 963 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 PCLAFQ15004 111 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 DUSP6Q16828 381 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 SPATA21Q7Z572 469 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 SRLQ86TD4 932 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 CENPLQ8N0S6 344 aaPredicted RBP13.63□□□□□ -0.23
CDC42-202ENST00000344548 TMEM151AQ8N4L1 468 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 SORCS1Q8WY21 1168 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 ACDQ96AP0 544 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 CDKN2AIPNLQ96HQ2 116 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 ZFYVE19Q96K21 471 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 OMDQ99983 421 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 IGFLR1Q9H665 355 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 PIDD1Q9HB75 910 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 BPIFA1Q9NP55 256 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 ACSS2Q9NR19 701 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 SIRPGQ9P1W8 387 aa13.63□□□□□ -0.23
CDC42-202ENST00000344548 TRAFD1O14545 582 aaPredicted RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 SLC7A4O43246 635 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 GLRA3O75311 464 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 CYBBP04839 570 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 ALDH3A1P30838 453 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 PLK1P53350 603 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 PRAMEP78395 509 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 SEMG2Q02383 582 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 BST1Q10588 318 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 CHI3L2Q15782 390 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 SLC14A2Q15849 920 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 RETSATQ6NUM9 610 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 ADIPOR2Q86V24 386 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 GPATCH11Q8N954 259 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 KCTD4Q8WVF5 259 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 MFSD1Q9H3U5 465 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 ABCF3Q9NUQ8 709 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 DCDC2Q9UHG0 476 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 CRYL1Q9Y2S2 319 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 NUMBLQ9Y6R0 609 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 OTOL1A6NHN0 477 aaPredicted RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 LINC01565O15544 149 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 BNIP3LO60238 219 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 FGF19O95750 216 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 GLP2RO95838 553 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 WEE1P30291 646 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 LEPRP48357 1165 aaKnown RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 FASTKD1Q53R41 847 aaKnown RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 PPP2R2DQ66LE6 453 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 ZNF549Q6P9A3 640 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 RAPH1Q70E73 1250 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 GLT6D1Q7Z4J2 308 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 RFWD2Q8NHY2 731 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 PIH1D2Q8WWB5 315 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 FAM167BQ9BTA0 163 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 CPSF2Q9P2I0 782 aaKnown RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 FNDC3AQ9Y2H6 1198 aaKnown RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 STARD13Q9Y3M8 1113 aa13.62□□□□□ -0.23
CDC42-202ENST00000344548 ARIH1Q9Y4X5 557 aaPredicted RBP13.62□□□□□ -0.23
CDC42-202ENST00000344548 ITM2AO43736 263 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 GLRBP48167 497 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 CD151P48509 253 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 GEN1Q17RS7 908 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 KYAT3Q6YP21 454 aaKnown RBP13.61□□□□□ -0.23
CDC42-202ENST00000344548 C12orf40Q86WS4 652 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 NUDCD3Q8IVD9 361 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 C10orf107Q8IVU9 208 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 OTUD6BQ8N6M0 293 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 ELMO2Q96JJ3 720 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
CDC42-202ENST00000344548 GGA2Q9UJY4 613 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 A8MX80 341 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.61□□□□□ -0.23
CDC42-202ENST00000344548 TK2O00142 265 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 RPP40O75818 363 aaKnown RBP13.61□□□□□ -0.23
CDC42-202ENST00000344548 FGF3P11487 239 aaPredicted RBP13.61□□□□□ -0.23
CDC42-202ENST00000344548 NEFHP12036 1026 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 CA5AP35218 305 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 CDKN2DP55273 166 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 TIAL1Q01085 375 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDC42-202ENST00000344548 FAM78AQ5JUQ0 283 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 MBLAC2Q68D91 279 aa13.61□□□□□ -0.23
CDC42-202ENST00000344548 PDE12Q6L8Q7 609 aaKnown RBP13.61□□□□□ -0.23
CDC42-202ENST00000344548 TMEM207Q6UWW9 146 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms