RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GPSM1Q86YR5 675 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 HTRA1Q92743 480 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ITPKCQ96DU7 683 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SERPINB11Q96P15 392 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ACOX2Q99424 681 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ELOVL6Q9H5J4 265 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A7Q9HAW7 530 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A10Q9HAW8 530 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A8Q9HAW9 530 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MIEF1Q9NQG6 463 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ACTR3BQ9P1U1 418 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ADAMTS6Q9UKP5 1117 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 FAM50BQ9Y247 325 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 LOC100506127A0A0U1RQW1 187 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CILPO75339 1184 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TMBIM6P55061 237 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 SLC25A11Q02978 314 aaKnown RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 SLC9B1Q4ZJI4 515 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 GLYATQ6IB77 296 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 VSIG10LQ86VR7 867 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PHLPP1O60346 1717 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 RAP2AP10114 183 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 RIPPLY1Q0D2K3 151 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 SPRED3Q2MJR0 410 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ARHGAP17Q68EM7 881 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 OR52E8Q6IFG1 317 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 NEPROQ6NW34 567 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 GALNT18Q6P9A2 607 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 LCLAT1Q6UWP7 414 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 KBTBD2Q8IY47 623 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CYP4Z2PQ8N1L4 340 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 OPTCQ9UBM4 332 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TNFSF13BQ9Y275 285 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 FARP1Q9Y4F1 1045 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 SNX8Q9Y5X2 465 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ANGPTL1O95841 491 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 HOXC6P09630 235 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF7P17097 686 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TNFSF9P41273 254 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 SPESP1Q6UW49 350 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 EIF3MQ7L2H7 374 aaKnown RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 LRRC52Q8N7C0 313 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 C12orf29Q8N999 325 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CERKQ8TCT0 537 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 FBXO44Q9H4M3 255 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 POLE3Q9NRF9 147 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 DUSP12Q9UNI6 340 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 FAM159BA6NKW6 160 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 M0QX08 132 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TK2O00142 265 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 SLC28A1O00337 649 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TSPAN9O75954 239 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CD48P09326 243 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CETPP11597 493 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ALOX15P16050 662 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PRKCHP24723 683 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 GPX6P59796 221 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CNTN1Q12860 1018 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TMEM110Q86TL2 294 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 DNAJB8Q8NHS0 232 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 SUN5Q8TC36 379 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 DENND1AQ8TEH3 1009 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PIK3R3Q92569 461 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ING4Q9UNL4 249 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 IPPQ9Y573 584 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ATAD5Q96QE3 1844 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CLCN3P51790 818 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 IL23RQ5VWK5 629 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 LLGL2Q6P1M3 1020 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PAGE2Q7Z2X7 111 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ITCHQ96J02 903 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 FEM1CQ96JP0 617 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CDK5RAP1Q96SZ6 601 aaKnown RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 MIPEPQ99797 713 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 FDXACB1Q9BRP7 624 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 FAM126AQ9BYI3 521 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 IKZF4Q9H2S9 585 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ATRNL1Q5VV63 1379 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 LGR5O75473 907 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CCR3P51677 355 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ARHGEF7Q14155 803 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PPP1R26Q5T8A7 1209 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PRR23BQ6ZRT6 265 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CUZD1Q86UP6 607 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ZFP28Q8NHY6 868 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ZUFSPQ96AP4 578 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 C12orf43Q96C57 262 aaKnown RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 HDHD2Q9H0R4 259 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PRDM12Q9H4Q4 367 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TRMT13Q9NUP7 481 aaKnown RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 MKS1Q9NXB0 559 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 STOML2Q9UJZ1 356 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF701M0R085 212 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-203ENST00000343508 OTCP00480 354 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 TTPAP49638 278 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 FOXM1Q08050 763 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CTBP1Q13363 440 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 CAPSQ13938 189 aa4.8□□□□□ -1.64
CSMD3-203ENST00000343508 PLCL1Q15111 1095 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms