RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 BTBD6Q96KE9 485 aa10.44□□□□□ -0.74
TPM3-207ENST00000341372 MAGEB10Q96LZ2 347 aaPredicted RBP10.44□□□□□ -0.74
TPM3-207ENST00000341372 CRB3Q9BUF7 120 aa10.44□□□□□ -0.74
TPM3-207ENST00000341372 DHX35Q9H5Z1 703 aaKnown RBP10.44□□□□□ -0.74
TPM3-207ENST00000341372 GPAMQ9HCL2 828 aa10.44□□□□□ -0.74
TPM3-207ENST00000341372 ATP13A1Q9HD20 1204 aa10.44□□□□□ -0.74
TPM3-207ENST00000341372 WSB2Q9NYS7 404 aaPredicted RBP10.44□□□□□ -0.74
TPM3-207ENST00000341372 CTTNBP2NLQ9P2B4 639 aa10.44□□□□□ -0.74
TPM3-207ENST00000341372 CEP250Q9BV73 2442 aa10.44□□□□□ -0.74
TPM3-207ENST00000341372 RAMP2O60895 175 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 PROSCO94903 275 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 ZRANB2O95218 330 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM3-207ENST00000341372 CD160O95971 181 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 RBP3P10745 1247 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 VAV1P15498 845 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 GLDCP23378 1020 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 CD6P30203 668 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 ACVRL1P37023 503 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 SERPINH1P50454 418 aaKnown RBP10.43□□□□□ -0.74
TPM3-207ENST00000341372 SLC20A2Q08357 652 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 SF1Q15637 639 aaKnown RBP10.43□□□□□ -0.74
TPM3-207ENST00000341372 C16orf54Q6UWD8 224 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 RFX8Q6ZV50 586 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 USP30Q70CQ3 517 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 LPCAT2Q7L5N7 544 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 RHOT2Q8IXI1 618 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 CCDC170Q8IYT3 715 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
TPM3-207ENST00000341372 RFFLQ8WZ73 363 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 SLC6A18Q96N87 628 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 KLC2Q9H0B6 622 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 PABPC3Q9H361 631 aaKnown RBP10.43□□□□□ -0.74
TPM3-207ENST00000341372 SMOC1Q9H4F8 434 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 C14orf119Q9NWQ9 140 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 DONSONQ9NYP3 566 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 DNAI1Q9UI46 699 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 TRAF6Q9Y4K3 522 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 GON4LQ3T8J9 2241 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 BCLAF3A2AJT9 711 aaKnown RBP10.43□□□□□ -0.74
TPM3-207ENST00000341372 C10orf142B7Z368 130 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 J3QW42 95 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 EEF2KO00418 725 aaKnown RBP10.43□□□□□ -0.74
TPM3-207ENST00000341372 CRTAMO95727 393 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 NAT2P11245 290 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 OXTRP30559 389 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 NUMBP49757 651 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 NDST2P52849 883 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 DPYSQ14117 519 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 DLG2Q15700 870 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 CST6Q15828 149 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 PARP15Q460N3 678 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 C1QTNF12Q5T7M4 302 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 AFMIDQ63HM1 303 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 TXNRD3NBQ6F5E7 133 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 RETSATQ6NUM9 610 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 C22orf39Q6P5X5 142 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 CFAP161Q6P656 301 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 SLC41A1Q8IVJ1 513 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 TTC30BQ8N4P2 665 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 DCLK2Q8N568 766 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 MEIOBQ8N635 442 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 GPBAR1Q8TDU6 330 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 SGCZQ96LD1 299 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 KLHL25Q9H0H3 589 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 PCED1AQ9H1Q7 454 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 LRRC19Q9H756 370 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 PARD6AQ9NPB6 346 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 TIMMDC1Q9NPL8 285 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 SAMD15Q9P1V8 674 aa10.43□□□□□ -0.74
TPM3-207ENST00000341372 CACNA1EQ15878 2313 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 ZSCAN5CA6NGD5 496 aaPredicted RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 CBX4O00257 560 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 MCF2LO15068 1137 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 AP1G1O43747 822 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 ZNF821O75541 412 aaPredicted RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 DNTTP04053 509 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 ACADMP11310 421 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 GOT1P17174 413 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 MPLP40238 635 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 HADHBP55084 474 aaKnown RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 POLD3Q15054 466 aaPredicted RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 CSRP2Q16527 193 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 BBS9Q3SYG4 887 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 TTC31Q49AM3 519 aaPredicted RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 POLNQ7Z5Q5 900 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 STK40Q8N2I9 435 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 PCDH20Q8N6Y1 951 aaKnown RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 ATP11CQ8NB49 1132 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 CADM4Q8NFZ8 388 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 OR8D1Q8WZ84 308 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 ISG20Q96AZ6 181 aaKnown RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 ZNF419Q96HQ0 510 aaPredicted RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 CWC15Q9P013 229 aaKnown RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 RCOR3Q9P2K3 495 aaPredicted RBP10.42□□□□□ -0.74
TPM3-207ENST00000341372 WASF2Q9Y6W5 498 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 PI4KAP42356 2102 aa10.42□□□□□ -0.74
TPM3-207ENST00000341372 RASA4BC9J798 803 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 K7ERQ8 282 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 RASA4O43374 803 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms