RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 RPS9P46781 194 aaKnown RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 CDH15P55291 814 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 PTPRNQ16849 979 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 FBXO48Q5FWF7 155 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 C9orf57Q5W0N0 161 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 EMID1Q96A84 441 aaPredicted RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 ERLEC1Q96DZ1 483 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 PPM1MQ96MI6 270 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 KLHL5Q96PQ7 755 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 TAF4O00268 1085 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 PEX10O60683 326 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 OR6B1O95007 311 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ADSLP30566 484 aaPredicted RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 CYP2C18P33260 490 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ABL2P42684 1182 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 CRTC3Q6UUV7 619 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 NKAPQ8N5F7 415 aaKnown RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 GANCQ8TET4 914 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 TWNKQ96RR1 684 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 SEMA3CQ99985 751 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ITGB1BP2Q9UKP3 347 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 TMA7Q9Y2S6 64 aaKnown RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 MYH15Q9Y2K3 1946 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 PNMA8CA0A1B0GUJ8 204 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 PTPN3P26045 913 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 JAG1P78504 1218 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 CDHR3Q6ZTQ4 885 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 LGI2Q8N0V4 545 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ABHD8Q96I13 439 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 GPR20Q99678 358 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 PKP2Q99959 881 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 NUAK2Q9H093 628 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 RBMX2Q9Y388 322 aaKnown RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 TIMM22Q9Y584 194 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 G3V2T6 193 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 PRRG1O14668 218 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 RNASEH1O60930 286 aaKnown RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ZNF7P17097 686 aaPredicted RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 CEP78Q5JTW2 689 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 C1orf220Q5T0J3 134 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ESRP1Q6NXG1 681 aaKnown RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 TMEM86AQ8N2M4 240 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ELMOD1Q8N336 334 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 CPSF7Q8N684 471 aaKnown RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 PCDHB8Q9UN66 801 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 TBC1D30Q9Y2I9 924 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ROBO1Q9Y6N7 1651 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 HOXC6P09630 235 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 FGFR1P11362 822 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 NCK1P16333 377 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 DDX5P17844 614 aaKnown RBP14.88□□□□□ -0.03
RRP1B-201ENST00000340648 ZNF605Q86T29 641 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 UBASH3BQ8TF42 649 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 HEXDCQ8WVB3 486 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 TWIST2Q8WVJ9 160 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 EHD3Q9NZN3 535 aa14.88□□□□□ -0.03
RRP1B-201ENST00000340648 CCL22O00626 93 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 L1CAMP32004 1257 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 GALNT3Q14435 633 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 INAQ16352 499 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 RAP1GAP2Q684P5 730 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 GLYATQ6IB77 296 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 KCTD8Q6ZWB6 473 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 NANOGNBQ7Z5D8 188 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 PLEKHH3Q7Z736 793 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 TMEM192Q8IY95 271 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 S100ZQ8WXG8 99 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 CENPNQ96H22 339 aaPredicted RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 TEKT5Q96M29 485 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 LPIN3Q9BQK8 851 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 PDZD7Q9H5P4 517 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 LIN28AQ9H9Z2 209 aaKnown RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 KRT84Q9NSB2 600 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 DNAAF2Q9NVR5 837 aaKnown RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 ARIH2O95376 493 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 MT-CYBP00156 380 aaPredicted RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 SCNN1GP51170 649 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 LIPEQ05469 1076 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 ILF2Q12905 390 aaKnown RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 VGLL4Q14135 290 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 NFE2Q16621 373 aaPredicted RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 MBLAC2Q68D91 279 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 C11orf96Q7Z7L8 435 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 UXTQ9UBK9 157 aaPredicted RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 NEMP2A6NFY4 417 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 NRG1Q02297 640 aaPredicted RBP14.87□□□□□ -0.03
RRP1B-201ENST00000340648 MFSD10Q14728 455 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 FAM35AQ86V20 835 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 PROSER1Q86XN7 944 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 SNX8Q9Y5X2 465 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 MAGP20916 626 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 NCF4Q15080 339 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 FAM187BQ17R55 369 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 PAGE2BQ5JRK9 111 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 ZNF549Q6P9A3 640 aa14.87□□□□□ -0.03
RRP1B-201ENST00000340648 MYLPFQ96A32 169 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms