RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 IGLV3-19P01714 112 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 TUBBP07437 444 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 ACADMP11310 421 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 CYP2A6P11509 494 aaPredicted RBP17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 HOXA6P31267 233 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 ABL2P42684 1182 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 ELP6Q0PNE2 266 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 HLTFQ14527 1009 aaKnown RBP eCLIP17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 HIF1AQ16665 826 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 AGBL4Q5VU57 503 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 ANO7Q6IWH7 933 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 ERAP2Q6P179 960 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 WDR93Q6P2C0 686 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 PDIK1LQ8N165 341 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 TMEM105Q8N8V8 129 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 MDGA1Q8NFP4 955 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 NEUROG2Q9H2A3 272 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 PCDH12Q9NPG4 1184 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 ITM2CQ9NQX7 267 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 SPATA6Q9NWH7 488 aaPredicted RBP17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 FBXL12Q9NXK8 326 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 BFARQ9NZS9 450 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 BCCIPQ9P287 314 aaKnown RBP eCLIP17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 MTRF1LQ9UGC7 380 aaKnown RBP17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 NCKAP1Q9Y2A7 1128 aa17.96■□□□□ 0.47
SDCBP2-201ENST00000339987 K7ESF4 209 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 PLK4O00444 970 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 AREL1O15033 823 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 EIF3HO15372 352 aaKnown RBP eCLIP17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 RNASEH2AO75792 299 aaKnown RBP17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 CTPS1P17812 591 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 MCM3P25205 808 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 HNF1BP35680 557 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 MMP12P39900 470 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 SESN2P58004 480 aaPredicted RBP17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 DNAJC21Q5F1R6 531 aaKnown RBP17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 PGBD3Q8N328 593 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 MYRIPQ8NFW9 859 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 RANBP9Q96S59 729 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 IL22Q9GZX6 179 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 TSPYL1Q9H0U9 437 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 TRABDQ9H4I3 376 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 EPHX3Q9H6B9 360 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 PRMT8Q9NR22 394 aaPredicted RBP17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 B4GALT6Q9UBX8 382 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 SERGEFQ9UGK8 458 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 SPO11Q9Y5K1 396 aa17.95■□□□□ 0.46
SDCBP2-201ENST00000339987 SDR42E2A6NKP2 422 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 E7ESA3 106 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 SPINT1O43278 529 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 CTIFO43310 598 aaKnown RBP17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 AVILO75366 819 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 PRKCGP05129 697 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 ALPIP09923 528 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 TPH1P17752 444 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 VIPR1P32241 457 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 FNBP1LQ5T0N5 605 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 CERCAMQ5T4B2 595 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 CEP128Q6ZU80 1094 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 DPPA4Q7L190 304 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 BRSK1Q8TDC3 778 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 GANCQ8TET4 914 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 LRRC39Q96DD0 335 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 PWWP2AQ96N64 755 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 SMIM14Q96QK8 99 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 FMO2Q99518 471 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 PIH1D1Q9NWS0 290 aaKnown RBP17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 NFU1Q9UMS0 254 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 FADS3Q9Y5Q0 445 aa17.94■□□□□ 0.46
SDCBP2-201ENST00000339987 NPIPB15A6NHN6 443 aaPredicted RBP17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 ZNF217O75362 1048 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 PIRTP0C851 137 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 MGAT1P26572 445 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 TPMTP51580 245 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 TAS2R38P59533 333 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 VSNL1P62760 191 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 FAM193AP78312 1265 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 LAMB3Q13751 1172 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 NAA30Q147X3 362 aaPredicted RBP17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 CDKN3Q16667 212 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 TMEM52BQ4KMG9 183 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 LRRC73Q5JTD7 316 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 CCNI2Q6ZMN8 369 aaPredicted RBP17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 CENPUQ71F23 418 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 BLOC1S5Q8TDH9 187 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 PTCD2Q8WV60 388 aaKnown RBP17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 SIGLEC10Q96LC7 697 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 RAB21Q9UL25 225 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 ZNF711Q9Y462 761 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 TRIOO75962 3097 aa17.93■□□□□ 0.46
SDCBP2-201ENST00000339987 H0Y858 1186 aa17.92■□□□□ 0.46
SDCBP2-201ENST00000339987 TSPAN6O43657 245 aa17.92■□□□□ 0.46
SDCBP2-201ENST00000339987 PLRG1O43660 514 aaKnown RBP17.92■□□□□ 0.46
SDCBP2-201ENST00000339987 CRTAMO95727 393 aa17.92■□□□□ 0.46
SDCBP2-201ENST00000339987 ZNF30P17039 623 aa17.92■□□□□ 0.46
SDCBP2-201ENST00000339987 ADRA1DP25100 572 aa17.92■□□□□ 0.46
SDCBP2-201ENST00000339987 ADPRHP54922 357 aa17.92■□□□□ 0.46
SDCBP2-201ENST00000339987 DHX9Q08211 1270 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms