RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PLIN5Q00G26 463 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 PPP3CAQ08209 521 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 DGUOKQ16854 277 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 BTBD16Q32M84 506 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 CCNYL2Q5T2Q4 361 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 USP17L2Q6R6M4 530 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 CAMKK1Q8N5S9 505 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF557Q8N988 423 aaPredicted RBP9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC7A14Q8TBB6 771 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 FANK1Q8TC84 345 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 DEDD2Q8WXF8 326 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 CPB2Q96IY4 423 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 C11orf70Q9BRQ4 267 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 RHOBTB2Q9BYZ6 727 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 TRIM15Q9C019 465 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 IL1RL2Q9HB29 575 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 AASSQ9UDR5 926 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 WBP11Q9Y2W2 641 aaKnown RBP9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 MAGED1Q9Y5V3 778 aaPredicted RBP9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 C10orf71Q711Q0 1435 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 TEX51A0A1B0GUA7 166 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 WTIPA6NIX2 430 aaPredicted RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 LINC00587B1AMM8 73 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 FAM86B1E9PN63 330 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 DFFAO00273 331 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 PDE8BO95263 885 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 CFHP08603 1231 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 POU2F1P14859 743 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 CYP11B1P15538 503 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 IL1R2P27930 398 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 AXLP30530 894 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC7A1P30825 629 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TBPL2Q6SJ96 375 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 NRARPQ7Z6K4 114 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 CAMK1DQ8IU85 385 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 WDR49Q8IV35 697 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 UBQLNLQ8IYU4 475 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SFRP1Q8N474 314 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 OR7D4Q8NG98 312 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 OR13J1Q8NGT2 312 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MCFD2Q8NI22 146 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 DDX1Q92499 740 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ATXN7L3BQ96GX2 97 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 PHOX2BQ99453 314 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TINAGL1Q9GZM7 467 aaPredicted RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MS4A7Q9GZW8 240 aaPredicted RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 C6orf50Q9HD87 102 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 FBXO8Q9NRD0 319 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TAS2R9Q9NYW1 312 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MAFFQ9ULX9 164 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 RAD54BQ9Y620 910 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 F5H423 210 aaPredicted RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 DNTTP04053 509 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SERPINE1P05121 402 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ATP5BP06576 529 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 YES1P07947 543 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TALDO1P37837 337 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MAP2K4P45985 399 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC12A3P55017 1021 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 RAD51Q06609 339 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 GALEQ14376 348 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TYSND1Q2T9J0 566 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SMTNL2Q2TAL5 461 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 GRTP1Q5TC63 336 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 GARNL3Q5VVW2 1013 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 EPGNQ6UW88 154 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 STRADAQ7RTN6 431 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SPPL2CQ8IUH8 684 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC9A9Q8IVB4 645 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TRIM48Q8IWZ4 208 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 BBS7Q8IWZ6 715 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 CMTR2Q8IYT2 770 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 CLYBLQ8N0X4 340 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ANKFN1Q8N957 763 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC44A5Q8NCS7 719 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC22A17Q8WUG5 538 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 AFG1LQ8WV93 481 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SEMA4DQ92854 862 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ZHX1-C8orf76Q96EF9 292 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ASB2Q96Q27 587 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 NAP1L4Q99733 375 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SORBS1Q9BX66 1292 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 CEP41Q9BYV8 373 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MMP28Q9H239 520 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 PCDH9Q9HC56 1237 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 DCAF16Q9NXF7 216 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 RPH3AQ9Y2J0 694 aaPredicted RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 FIS1Q9Y3D6 152 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 HES2Q9Y543 173 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 AREL1O15033 823 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC16A3O15427 465 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 IL7P13232 177 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 DNAJB2P25686 324 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 LRPAP1P30533 357 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ENPEPQ07075 957 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MADCAM1Q13477 382 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 EFR3AQ14156 821 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MFSD13AQ14CX5 517 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms