RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 H3BMM5 538 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 HDAC3O15379 428 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 COCHO43405 550 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 SKIP12755 728 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 PAMP19021 973 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 PEX2P28328 305 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 THOP1P52888 689 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 FOXA1P55317 472 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 MRPS22P82650 360 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 SERINC3Q13530 473 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 HNRNPDQ14103 355 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 TRIP4Q15650 581 aaPredicted RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 TAF12Q16514 161 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 FAM26DQ5JW98 314 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 ATXN7L2Q5T6C5 722 aaPredicted RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 UMODL1-AS1Q8N2C9 162 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 OR4K2Q8NGD2 314 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 MYLIPQ8WY64 445 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 C8orf48Q96LL4 319 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 MRPL46Q9H2W6 279 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 VPS45Q9NRW7 570 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 ADAMTS6Q9UKP5 1117 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 POMPQ9Y244 141 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 RAP2CQ9Y3L5 183 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 COPG1Q9Y678 874 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 ARVCFO00192 962 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 PRAMEF12O95522 483 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 XRCC1P18887 633 aaPredicted RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 CST5P28325 142 aaPredicted RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 PMLP29590 882 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 CORO1AP31146 461 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 VHLP40337 213 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 ARL1P40616 181 aaPredicted RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 HADHAP40939 763 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 ACTR3P61158 418 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 SULT2A1Q06520 285 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 PFKFB4Q16877 469 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 STXBP5Q5T5C0 1151 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 SMYD5Q6GMV2 418 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 NUDT8Q8WV74 236 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 SLC30A3Q99726 388 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 TTPALQ9BTX7 342 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 TUBB6Q9BUF5 446 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 SMG9Q9H0W8 520 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 ZNF212Q9UDV6 495 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 CDYLQ9Y232 598 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 FRMPD3Q5JV73 1810 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 TXNDC9O14530 226 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 S1PR4O95977 384 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 RAG1P15918 1043 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 CES1P23141 567 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 CDK7P50613 346 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 YBX1P67809 324 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 BTKQ06187 659 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 CDK18Q07002 472 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 TWF1Q12792 350 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 DNAL1Q4LDG9 190 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 TECRLQ5HYJ1 363 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 LRRC73Q5JTD7 316 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 HABP4Q5JVS0 413 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 KIAA0930Q6ICG6 404 aaPredicted RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 SDCCAG8Q86SQ7 713 aaPredicted RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 CARNMT1Q8N4J0 409 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 KDM1BQ8NB78 822 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 WFDC5Q8TCV5 224 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 SREK1Q8WXA9 508 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 ERLEC1Q96DZ1 483 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 C3orf30Q96M34 536 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 UBE2OQ9C0C9 1292 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 PRDM16Q9HAZ2 1276 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 ATP13A1Q9HD20 1204 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 NDE1Q9NXR1 346 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 DLGAP2Q9P1A6 1054 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 FCF1Q9Y324 198 aaKnown RBP8.88□□□□□ -0.99
SNCA-201ENST00000336904 VWA7Q9Y334 891 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 TRIM17Q9Y577 477 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 HNRNPCL1O60812 293 aaKnown RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 DNAJA2O60884 412 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 CABYRO75952 493 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 ALPIP09923 528 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 SLC2A3P11169 496 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 HOXD9P28356 352 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 MZF1P28698 734 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 FAM189BP81408 668 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 MSLNQ13421 630 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 OR4D1Q15615 310 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 UGP2Q16851 508 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 DEFB115Q30KQ5 88 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 C6orf163Q5TEZ5 329 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 ARHGAP24Q8N264 748 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 PHC3Q8NDX5 983 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 FAM110BQ8TC76 370 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 ZNF296Q8WUU4 475 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 LRCH3Q96II8 777 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 RPL10LQ96L21 214 aaKnown RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 PCDHAC1Q9H158 963 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 SLC24A3Q9HC58 644 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 SEMA4BQ9NPR2 832 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms