RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 USP45Q70EL2 814 aa13.78□□□□□ -0.2
TUBA1B-202ENST00000336023 RASSF3Q86WH2 238 aa13.78□□□□□ -0.2
TUBA1B-202ENST00000336023 ZCCHC9Q8N567 271 aaKnown RBP13.78□□□□□ -0.2
TUBA1B-202ENST00000336023 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
TUBA1B-202ENST00000336023 FRMD8Q9BZ67 464 aaPredicted RBP13.78□□□□□ -0.2
TUBA1B-202ENST00000336023 NEUROG2Q9H2A3 272 aa13.78□□□□□ -0.2
TUBA1B-202ENST00000336023 EBF1Q9UH73 591 aa13.78□□□□□ -0.2
TUBA1B-202ENST00000336023 K7ESF4 209 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 NFKBIAP25963 317 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 MAGEA3P43357 314 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 TPMTP51580 245 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 SUOXP51687 545 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 MSLNQ13421 630 aaPredicted RBP13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 CERCAMQ5T4B2 595 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 DENND2CQ68D51 928 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 ERAP2Q6P179 960 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 USP30Q70CQ3 517 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 KBTBD6Q86V97 674 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 PDIK1LQ8N165 341 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 BLOC1S5Q8TDH9 187 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 RUBCNQ92622 972 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 RAB7BQ96AH8 199 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM131CQ96AQ9 280 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 LYSMD1Q96S90 227 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM129AQ9BZQ8 928 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 CD93Q9NPY3 652 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 ITM2CQ9NQX7 267 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 B4GALT6Q9UBX8 382 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 NFU1Q9UMS0 254 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 NCKAP1Q9Y2A7 1128 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
TUBA1B-202ENST00000336023 CAPN8A6NHC0 703 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 NPIPB15A6NHN6 443 aaPredicted RBP13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 A8MX80 341 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 AREL1O15033 823 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 SPINT1O43278 529 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 LAMTOR5O43504 91 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 ECHS1P30084 290 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 NPY2RP49146 381 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 ARL4CP56559 192 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 POU6F1Q14863 301 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 HIF1AQ16665 826 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 MSS51Q4VC12 460 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM124AQ86V42 546 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 C1orf210Q8IVY1 113 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 GPR161Q8N6U8 529 aaKnown RBP13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 DTWD2Q8NBA8 298 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 TPSD1Q9BZJ3 242 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 MAGEE1Q9HCI5 957 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 BFARQ9NZS9 450 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 USP36Q9P275 1121 aaKnown RBP13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 FZD4Q9ULV1 537 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 ITM2BQ9Y287 266 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 FADS3Q9Y5Q0 445 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 CACNA1IQ9P0X4 2223 aa13.76□□□□□ -0.21
TUBA1B-202ENST00000336023 A0A0U1RQS6 177 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM86C2PA6NEL3 165 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 SDR42E2A6NKP2 422 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 NEMP1O14524 444 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 SLC7A4O43246 635 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 PPFIA2O75334 1257 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 CYP2A6P11509 494 aaPredicted RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 MGAT1P26572 445 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 VIPR1P32241 457 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 MMP12P39900 470 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 TAS2R38P59533 333 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 CRADDP78560 199 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 ELP6Q0PNE2 266 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 BBS9Q3SYG4 887 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 TMEM31Q5JXX7 168 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 CRTC1Q6UUV9 634 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 TSPAN33Q86UF1 283 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 OR14C36Q8NHC7 312 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 BRSK1Q8TDC3 778 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 SRPK1Q96SB4 655 aaKnown RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 FMO2Q99518 471 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 IL22Q9GZX6 179 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 TRABDQ9H4I3 376 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 PRMT8Q9NR22 394 aaPredicted RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 HACD3Q9P035 362 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 MTRF1LQ9UGC7 380 aaKnown RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 GGT7Q9UJ14 662 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 C1orf232A0A0U1RR37 186 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 AURKAO14965 403 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 AXIN1O15169 862 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 PLRG1O43660 514 aaKnown RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 AP1G1O43747 822 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 ZNF217O75362 1048 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 BANF1O75531 89 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 IGLV3-19P01714 112 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 LHCGRP22888 699 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 TNFRSF8P28908 595 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 AVPR2P30518 371 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 HOXA6P31267 233 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 ADPRHP54922 357 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 VSNL1P62760 191 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 DHX9Q08211 1270 aaKnown RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 ELF2Q15723 593 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 CDKN3Q16667 212 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms