RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF470Q6ECI4 717 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF572Q7Z3I7 529 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 KBTBD2Q8IY47 623 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ASCC1Q8N9N2 400 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ACTL9Q8TC94 416 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ASB9Q96DX5 294 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MASTLQ96GX5 879 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 IRF2BPLQ9H1B7 796 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 KAT8Q9H7Z6 458 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 INTS7Q9NVH2 962 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TMEM260Q9NX78 707 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TBC1D24Q9ULP9 559 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ITGA2BP08514 1039 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 EPB42P16452 691 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MSR1P21757 451 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CFL1P23528 166 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CCR1P32246 355 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ACSM2AQ08AH3 577 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 BIKQ13323 160 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ACSM2BQ68CK6 577 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SMYD5Q6GMV2 418 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 KLHDC10Q6PID8 442 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ITIH5Q86UX2 942 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GPSM1Q86YR5 675 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 POF1BQ8WVV4 589 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NODALQ96S42 347 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SYNDIG1Q9H7V2 258 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SLC22A3O75751 556 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 OR6A2O95222 327 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GH1P01241 217 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 C8BP07358 591 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GLDCP23378 1020 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 HTR2AP28223 471 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 USP4Q13107 963 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CBLBQ13191 982 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 FAM153CQ494X1 144 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CBWD6Q4V339 395 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PIK3R6Q5UE93 754 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 DUPD1Q68J44 220 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 BEND5Q7L4P6 421 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TRABD2AQ86V40 505 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CMTR2Q8IYT2 770 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ATG4AQ8WYN0 398 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 HGH1Q9BTY7 390 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 FAM49AQ9H0Q0 323 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF358Q9NW07 568 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GAKO14976 1311 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TRIM64CA6NLI5 447 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 OR2AT4A6NND4 320 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ALDH4A1P30038 563 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ECHS1P30084 290 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 KCNJ1P48048 391 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 RHOAP61586 193 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 IFI35P80217 286 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 USF2Q15853 346 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 OCLNQ16625 522 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF423Q2M1K9 1284 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 HHIPL2Q6UWX4 724 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 AMIGO2Q86SJ2 522 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SLC4A11Q8NBS3 891 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CCDC32Q9BV29 185 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CXorf21Q9HAI6 301 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 ETNK2Q9NVF9 386 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PDE10AQ9Y233 779 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 RPTORQ8N122 1335 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 A0A1B0GVC2 190 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NDUFS2O75306 463 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TCEA3O75764 348 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 RAD17O75943 681 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 OR5F1O95221 314 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PIGNO95427 931 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NPPAP01160 153 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TDGQ13569 410 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 SYT16Q17RD7 645 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 Q3C1V9 767 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MARC1Q5VT66 337 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TMC8Q8IU68 726 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GLB1L3Q8NCI6 653 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 OR52K2Q8NGK3 314 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 DNAJB14Q8TBM8 379 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NUSAP1Q9BXS6 441 aaKnown RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 RERGLQ9H628 205 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 MKS1Q9NXB0 559 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PLEKP08567 350 aaPredicted RBP5.54□□□□□ -1.52
PTPRB-202ENST00000334414 CCNYL3P0C7X3 344 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 TPTEP56180 551 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PROSER3Q2NL68 480 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 C10orf120Q5SQS8 335 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 NIPA1Q7RTP0 329 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 UFD1Q92890 307 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 PPP1R16AQ96I34 528 aa5.54□□□□□ -1.52
PTPRB-202ENST00000334414 GH2P01242 217 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SLC6A2P23975 617 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF829Q3KNS6 432 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 HAGHLQ6PII5 290 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 LDHDQ86WU2 507 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 BBS4Q96RK4 519 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CCDC3Q9BQI4 270 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms