RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TM6SF2Q9BZW4 377 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 PIF1Q9H611 641 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 ZFP37Q9Y6Q3 630 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 KPNA3O00505 521 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 COCHO43405 550 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TPH1P17752 444 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 YBEYP58557 167 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 GAD2Q05329 585 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 STX5Q13190 355 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 SLC5A9Q2M3M2 681 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TRIM16LQ309B1 348 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 RBM44Q6ZP01 1051 aaKnown RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TAS2R42Q7RTR8 314 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 ZNF398Q8TD17 642 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 NTAN1Q96AB6 310 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 MARK4Q96L34 752 aa11.87□□□□□ -0.51
HDAC6-201ENST00000334136 TRMT61BQ9BVS5 477 aaKnown RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 IARS2Q9NSE4 1012 aaKnown RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 DDX28Q9NUL7 540 aaKnown RBP11.87□□□□□ -0.51
HDAC6-201ENST00000334136 WFS1O76024 890 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 HTR7P34969 479 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 RPS24P62847 133 aaKnown RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ANGPTL8Q6UXH0 198 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 DSG4Q86SJ6 1040 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ZMIZ2Q8NF64 920 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 FAM81AQ8TBF8 368 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 BLOC1S5Q8TDH9 187 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 MRPL38Q96DV4 380 aaKnown RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 VPS50Q96JG6 964 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ARHGEF38Q9NXL2 777 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 FZD10Q9ULW2 581 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 SLC30A1Q9Y6M5 507 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CAPN8A6NHC0 703 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 B4GALT3O60512 393 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 TBX10O75333 385 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 MGAT1P26572 445 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CHN2P52757 468 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 OGDHQ02218 1023 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 SPDYAQ5MJ70 313 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CIR1Q86X95 450 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 NIPA2Q8N8Q9 360 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ERLEC1Q96DZ1 483 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 LGMNQ99538 433 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 WNT6Q9Y6F9 365 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 STX7O15400 261 aaKnown RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 SNX2O60749 519 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CLASP2O75122 1294 aaKnown RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 PEX11AO75192 247 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ASMTLO95671 621 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 APODP05090 189 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CD48P09326 243 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ACADMP11310 421 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 TPP2P29144 1249 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 HSPA13P48723 471 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 MLLT6P55198 1093 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CDH4P55283 916 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 UGP2Q16851 508 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 FAM83EQ2M2I3 478 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 RINLQ6ZS11 566 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 NET1Q7Z628 596 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 UBR7Q8N806 425 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 EZH1Q92800 747 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CEP19Q96LK0 163 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 NECTIN4Q96NY8 510 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 POLR1EQ9GZS1 481 aaKnown RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 EML4Q9HC35 981 aaKnown RBP11.86□□□□□ -0.51
HDAC6-201ENST00000334136 GALNT8Q9NY28 637 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 AK5Q9Y6K8 562 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 SDK1Q7Z5N4 2213 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 MAN1A2O60476 641 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ZNF23P17027 643 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CXCR3P49682 368 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ANO7Q6IWH7 933 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 ARHGEF4Q9NR80 690 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 HCFC1R1Q9NWW0 138 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 CCDC167Q9P0B6 97 aa11.86□□□□□ -0.51
HDAC6-201ENST00000334136 A0A096LPK6 155 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 C2orf78A6NCI8 922 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 LIN7AO14910 233 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ERVK-10P10266 1014 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 CCNB1P14635 433 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 SNRPD1P62314 119 aaKnown RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 MPP3Q13368 585 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 CA9Q16790 459 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 B3GNT6Q6ZMB0 384 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 PAQR9Q6ZVX9 377 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 BCL7CQ8WUZ0 217 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 FICDQ9BVA6 458 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ADGRE3Q9BY15 652 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ACSS2Q9NR19 701 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 EFR3BQ9Y2G0 817 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 GON4LQ3T8J9 2241 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 M0R3G1 203 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 LEFTY2O00292 366 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ME2P23368 584 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 HADHAP40939 763 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms