RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RASA2Q15283 850 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 C6orf89Q6UWU4 347 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 BRSK1Q8TDC3 778 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 ADGRE3Q9BY15 652 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 PSAT1Q9Y617 370 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 TICRRQ7Z2Z1 1910 aa23.38■■□□□ 1.33
TSEN54-201ENST00000333213 GMNCA6NCL1 334 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 BUD23O43709 281 aaKnown RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 EIF2DP41214 584 aaKnown RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 MSH2P43246 934 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 MAPK8P45983 427 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 TSTD2Q5T7W7 516 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 ARMC12Q5T9G4 340 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 PLPP6Q8IY26 295 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 AGAP2Q99490 1192 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 ATP13A3Q9H7F0 1226 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 ZDHHC4Q9NPG8 344 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 PSMC3IPQ9P2W1 217 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 LIMD1Q9UGP4 676 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 TRIOO75962 3097 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 TBC1D3BA6NDS4 549 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 SOCS5O75159 536 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 KAT7O95251 611 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 F7P08709 466 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 MAGOHP61326 146 aaKnown RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 EIF4HQ15056 248 aaKnown RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 TMED2Q15363 201 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 HSP90AA5PQ58FG0 334 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 RIBC1Q8N443 379 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 CENPTQ96BT3 561 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 ECHDC3Q96DC8 303 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 CPEB1Q9BZB8 566 aaKnown RBP23.37■■□□□ 1.33
TSEN54-201ENST00000333213 ZDHHC6Q9H6R6 413 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 PPCSQ9HAB8 311 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 KCNK12Q9HB15 430 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 PLA2G4CQ9UP65 541 aa23.37■■□□□ 1.33
TSEN54-201ENST00000333213 WASH3PC4AMC7 463 aa23.36■■□□□ 1.33
TSEN54-201ENST00000333213 CCL22O00626 93 aa23.36■■□□□ 1.33
TSEN54-201ENST00000333213 POP4O95707 220 aaKnown RBP23.36■■□□□ 1.33
TSEN54-201ENST00000333213 FOSL2P15408 326 aa23.36■■□□□ 1.33
TSEN54-201ENST00000333213 NNMTP40261 264 aa23.36■■□□□ 1.33
TSEN54-201ENST00000333213 MGAT5Q09328 741 aa23.36■■□□□ 1.33
TSEN54-201ENST00000333213 EXOC3L1Q86VI1 746 aa23.36■■□□□ 1.33
TSEN54-201ENST00000333213 MZB1Q8WU39 189 aa23.36■■□□□ 1.33
TSEN54-201ENST00000333213 C20orf96Q9NUD7 363 aaPredicted RBP23.36■■□□□ 1.33
TSEN54-201ENST00000333213 VAPBO95292 243 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 ALPIP09923 528 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 CREB1P16220 341 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 CTPS1P17812 591 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 ABL2P42684 1182 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 ARSDP51689 593 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 TEDDM1Q5T9Z0 273 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 TXNDC11Q6PKC3 985 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 MARK2Q7KZI7 788 aaKnown RBP23.35■■□□□ 1.33
TSEN54-201ENST00000333213 KCNMB4Q86W47 210 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 SLC26A11Q86WA9 606 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 TUBGCP5Q96RT8 1024 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 RABEP2Q9H5N1 569 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 WASF2Q9Y6W5 498 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 TIMM44O43615 452 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 PAPSS2O95340 614 aaPredicted RBP23.35■■□□□ 1.33
TSEN54-201ENST00000333213 CTSLP07711 333 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 HLA-EP13747 358 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 CA4P22748 312 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 SERPINA4P29622 427 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 ZNF234Q14588 700 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 ARMC3Q5W041 872 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 ZNF449Q6P9G9 518 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 SLC44A3Q8N4M1 653 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 DEFB123Q8N688 67 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 OR13C4Q8NGS5 318 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 EZH1Q92800 747 aaPredicted RBP23.35■■□□□ 1.33
TSEN54-201ENST00000333213 HLA-CQ95604 372 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 PHF7Q9BWX1 381 aaPredicted RBP23.35■■□□□ 1.33
TSEN54-201ENST00000333213 TMEM245Q9H330 911 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 SUV39H2Q9H5I1 410 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 GGT7Q9UJ14 662 aa23.35■■□□□ 1.33
TSEN54-201ENST00000333213 HMX2A2RU54 273 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 UGT2B4P06133 528 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 INHBAP08476 426 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 HPDP32754 393 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-201ENST00000333213 GRIA4P48058 902 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 GALK1P51570 392 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 SWT1Q5T5J6 900 aaKnown RBP23.34■■□□□ 1.33
TSEN54-201ENST00000333213 IER5LQ5T953 404 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 KIAA0930Q6ICG6 404 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-201ENST00000333213 RASSF3Q86WH2 238 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 GRIN3AQ8TCU5 1115 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 EID2BQ96D98 161 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 ACOX2Q99424 681 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 ACTR5Q9H9F9 607 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-201ENST00000333213 ZFATQ9P243 1243 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 COL4A2P08572 1712 aa23.34■■□□□ 1.33
TSEN54-201ENST00000333213 GRIA2P42262 883 aa23.33■■□□□ 1.33
TSEN54-201ENST00000333213 ST8SIA6P61647 398 aa23.33■■□□□ 1.33
TSEN54-201ENST00000333213 ACVR1Q04771 509 aa23.33■■□□□ 1.33
TSEN54-201ENST00000333213 GPR153Q6NV75 609 aa23.33■■□□□ 1.33
TSEN54-201ENST00000333213 DNAJC1Q96KC8 554 aaKnown RBP23.33■■□□□ 1.33
TSEN54-201ENST00000333213 IARS2Q9NSE4 1012 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms