RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PRKD1Q15139 912 aaPredicted RBP15.96■□□□□ 0.15
PDGFB-201ENST00000331163 TAF1BQ53T94 588 aaPredicted RBP15.96■□□□□ 0.15
PDGFB-201ENST00000331163 Q7L0L9 218 aa15.96■□□□□ 0.15
PDGFB-201ENST00000331163 NUDCD3Q8IVD9 361 aa15.96■□□□□ 0.15
PDGFB-201ENST00000331163 NOL6Q9H6R4 1146 aaKnown RBP15.96■□□□□ 0.15
PDGFB-201ENST00000331163 TMEM248Q9NWD8 314 aa15.96■□□□□ 0.15
PDGFB-201ENST00000331163 RABGEF1Q9UJ41 708 aa15.96■□□□□ 0.15
PDGFB-201ENST00000331163 hCG_2014768A0A024R1R8 64 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 TPP1O14773 563 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 BAG2O95816 211 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 ASGR2P07307 311 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 PGAM1P18669 254 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 GALNTL6Q49A17 601 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 MSANTD2Q6P1R3 559 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 DOK6Q6PKX4 331 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 ISLR2Q6UXK2 745 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 ARCQ7LC44 396 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 IRF7Q92985 503 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 PGAP3Q96FM1 320 aaPredicted RBP15.96■□□□□ 0.14
PDGFB-201ENST00000331163 VPS39Q96JC1 886 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 MAGEH1Q9H213 219 aa15.96■□□□□ 0.14
PDGFB-201ENST00000331163 THG1LQ9NWX6 298 aaKnown RBP15.96■□□□□ 0.14
PDGFB-201ENST00000331163 OAS1P00973 400 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 PABPC1P11940 636 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SERPINB4P48594 390 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 YBEYP58557 167 aaPredicted RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 DLX2Q07687 328 aaPredicted RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SLC12A1Q13621 1099 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 CGB2Q6NT52 195 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 BPIFB1Q8TDL5 484 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 STMN2Q93045 179 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 CCDC97Q96F63 343 aaPredicted RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 KLHL32Q96NJ5 620 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 FCRL3Q96P31 734 aaPredicted RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 OLFM3Q96PB7 478 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 RPP25Q9BUL9 199 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 VCXQ9H320 206 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 NVLO15381 856 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 PEX11AO75192 247 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 MAT2AP31153 395 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 PTPN7P35236 360 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SLC6A11P48066 632 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 RASSF2P50749 326 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SEMA5AQ13591 1074 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 CAMK1Q14012 370 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 PLEKHG6Q3KR16 790 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SIRPB2Q5JXA9 342 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 MBLAC2Q68D91 279 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SDCCAG8Q86SQ7 713 aaPredicted RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 MTDHQ86UE4 582 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 DENND2DQ9H6A0 471 aaPredicted RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 ZFP69BQ9UJL9 534 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 RAD54BQ9Y620 910 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 IGSF6O95976 241 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 TPBGLP0DKB5 382 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 TAC1P20366 129 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 HLA-FP30511 346 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 NDST2P52849 883 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 HTRA4P83105 476 aaPredicted RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 RAB30Q15771 203 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 LRRC36Q1X8D7 754 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 HABP4Q5JVS0 413 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 TANGO2Q6ICL3 276 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 TMEM150AQ86TG1 271 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 PHOSPHO2Q8TCD6 241 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SIGLEC10Q96LC7 697 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 ADGRE3Q9BY15 652 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 IL22Q9GZX6 179 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SLC25A51Q9H1U9 297 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 LMCD1Q9NZU5 365 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 LIMD1Q9UGP4 676 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 SCOCQ9UIL1 159 aa15.95■□□□□ 0.14
PDGFB-201ENST00000331163 RUVBL2Q9Y230 463 aaKnown RBP15.95■□□□□ 0.14
PDGFB-201ENST00000331163 ERI2A8K979 691 aaKnown RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 RHOBTB1O94844 696 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 SPRP35270 261 aaPredicted RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 PTRHD1Q6GMV3 140 aaKnown RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 RD3Q7Z3Z2 195 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 GBP5Q96PP8 586 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 ACSS3Q9H6R3 686 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 TTC34A8MYJ7 566 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 LZTS3O60299 673 aaPredicted RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 CRCPO75575 148 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 KRT36O76013 467 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 SRP72O76094 671 aaKnown RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 ATP5BP06576 529 aaKnown RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 BGNP21810 368 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 IL10RBQ08334 325 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 PDAP1Q13442 181 aaKnown RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 TTC39BQ5VTQ0 682 aaPredicted RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 LRRC8BQ6P9F7 803 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 SUSD6Q92537 303 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 SPHK2Q9NRA0 654 aa15.94■□□□□ 0.14
PDGFB-201ENST00000331163 MTO1Q9Y2Z2 717 aaKnown RBP15.94■□□□□ 0.14
PDGFB-201ENST00000331163 GLP2RO95838 553 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 RPL34P49207 117 aaKnown RBP15.93■□□□□ 0.14
PDGFB-201ENST00000331163 RING1Q06587 406 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 NR1H3Q13133 447 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 ARSIQ5FYB1 569 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 FAM78AQ5JUQ0 283 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms