RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 CDH19Q9H159 772 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 TEX264Q9Y6I9 313 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 CCL16O15467 120 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 TCEA3O75764 348 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 KRT72Q14CN4 511 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 SETMARQ53H47 684 aaPredicted RBP17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 IFNLR1Q8IU57 520 aaPredicted RBP17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 RPL10LQ96L21 214 aaKnown RBP17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 TNKS2Q9H2K2 1166 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 SH3BP4Q9P0V3 963 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 CLCA2Q9UQC9 943 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 A0A1B0GVM2 712 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 TCAF2A6NFQ2 919 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 CCDC154A6NI56 674 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 FAM72CH0Y354 149 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 ZBTB14O43829 449 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 SIX1Q15475 284 aaPredicted RBP17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 INSCQ1MX18 579 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 FAM72AQ5TYM5 149 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 FAM72DQ6L9T8 149 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 FAM72BQ86X60 149 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 LNPEPQ9UIQ6 1025 aa17.11■□□□□ 0.33
PPP3CA-201ENST00000323055 PDZK1P1A8MUH7 402 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 TMEM114B3SHH9 223 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ALBP02768 609 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 HLA-DQB2P05538 268 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 BNIP1Q12981 228 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 TCEA2Q15560 299 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 DHFR2Q86XF0 187 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ZNF786Q8N393 782 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ZNF555Q8NEP9 628 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 GDPD5Q8WTR4 605 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 KCTD14Q9BQ13 255 aaPredicted RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 CXorf56Q9H5V9 222 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 COPS7BQ9H9Q2 264 aaPredicted RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 HPS4Q9NQG7 708 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 UGT2B4P06133 528 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 RD3Q7Z3Z2 195 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 PIGWQ7Z7B1 504 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 OR6Y1Q8NGX8 325 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 CLPTM1LQ96KA5 538 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 C1orf50Q9BV19 199 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ZFP14Q9HCL3 533 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 FLRT1Q9NZU1 646 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 APPL1Q9UKG1 709 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 FCF1Q9Y324 198 aaKnown RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 DYRK1BQ9Y463 629 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 RGSL1A5PLK6 1076 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 OR51F1A6NGY5 319 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 PTGESO14684 152 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 PFDN1O60925 122 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ZNF682O95780 498 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 LINC00032P0C843 101 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 EPB42P16452 691 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 MLLT6P55198 1093 aaPredicted RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 PPP1R15BQ5SWA1 713 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 PHACTR4Q8IZ21 702 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ELMO1Q92556 727 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ABTB1Q969K4 478 aaPredicted RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 FAM120BQ96EK7 910 aaKnown RBP17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 ASB2Q96Q27 587 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 FAM53CQ9NYF3 392 aa17.1■□□□□ 0.33
PPP3CA-201ENST00000323055 J3KR12 359 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 ATP6V1B2P21281 511 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 MAPK8P45983 427 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 SEMG2Q02383 582 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 OTUD3Q5T2D3 398 aaPredicted RBP17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 TSTD2Q5T7W7 516 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 FSTL5Q8N475 847 aaPredicted RBP17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 TDRKHQ9Y2W6 561 aaKnown RBP17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 VAV1P15498 845 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 RDH11Q8TC12 318 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 SUSD6Q92537 303 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 FIG4Q92562 907 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 SEMA6AQ9H2E6 1030 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 EIF2B3Q9NR50 452 aaKnown RBP17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 TLR6Q9Y2C9 796 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 SOCS7O14512 581 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 TOP3BO95985 862 aaKnown RBP17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 CYP2A6P11509 494 aaPredicted RBP17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 HTR7P34969 479 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 NDST2P52849 883 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 CDC16Q13042 620 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 AP1ARQ63HQ0 302 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 TTC33Q6PID6 262 aaPredicted RBP17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 FAM13CQ8NE31 585 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 SEC14L1Q92503 715 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 TBCDQ9BTW9 1192 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 MAGEH1Q9H213 219 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 ADAM7Q9H2U9 754 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 TRAF6Q9Y4K3 522 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 HS3ST4Q9Y661 456 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
PPP3CA-201ENST00000323055 MAGEA13PA6NCF6 341 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms