RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 KLHL35Q6PF15 583 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 LAYNQ6UX15 382 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 RPS27LQ71UM5 84 aaKnown RBP19.19■□□□□ 0.66
RTN4-201ENST00000317610 FASTKD5Q7L8L6 764 aaKnown RBP19.19■□□□□ 0.66
RTN4-201ENST00000317610 AQP12AQ8IXF9 295 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 LRRC43Q8N309 656 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 BBS5Q8N3I7 341 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 SMG8Q8ND04 991 aaKnown RBP19.19■□□□□ 0.66
RTN4-201ENST00000317610 MIPOL1Q8TD10 442 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 TMEM40Q8WWA1 233 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 L3HYPDHQ96EM0 354 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 IPPQ9Y573 584 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 PTCH2Q9Y6C5 1203 aa19.19■□□□□ 0.66
RTN4-201ENST00000317610 MBLAC1A4D2B0 266 aaPredicted RBP19.18■□□□□ 0.66
RTN4-201ENST00000317610 YWHAQP27348 245 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 HOXC13P31276 330 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 GRIA3P42263 894 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 CDH15P55291 814 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 NME5P56597 212 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 SNX17Q15036 470 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 ZBED5Q49AG3 693 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 DUSP28Q4G0W2 176 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 ZNF789Q5FWF6 425 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
RTN4-201ENST00000317610 RETREG3Q86VR2 466 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 ANKRD13AQ8IZ07 590 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 SNX31Q8N9S9 440 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 PCYOX1LQ8NBM8 494 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 TSPAN17Q96FV3 270 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 MRGPRX2Q96LB1 330 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 PHF12Q96QT6 1004 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 RHBDL2Q9NX52 303 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 MYBPHLA2RUH7 354 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 PTGESO14684 152 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 IGFBP6P24592 240 aaPredicted RBP19.18■□□□□ 0.66
RTN4-201ENST00000317610 PRMT9Q6P2P2 845 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 GPR141Q7Z602 305 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 GALNT7Q86SF2 657 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 CAMK1DQ8IU85 385 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 EPHX4Q8IUS5 362 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 RBM12BQ8IXT5 1001 aaKnown RBP19.18■□□□□ 0.66
RTN4-201ENST00000317610 TNIP2Q8NFZ5 429 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 PPP1R10Q96QC0 940 aaKnown RBP19.18■□□□□ 0.66
RTN4-201ENST00000317610 HOPXQ9BPY8 73 aaPredicted RBP19.18■□□□□ 0.66
RTN4-201ENST00000317610 SLC39A3Q9BRY0 314 aa19.18■□□□□ 0.66
RTN4-201ENST00000317610 GMPR2Q9P2T1 348 aaKnown RBP19.18■□□□□ 0.66
RTN4-201ENST00000317610 HLA-DQB2P05538 268 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 ALDOCP09972 364 aaKnown RBP19.17■□□□□ 0.66
RTN4-201ENST00000317610 IMPDH2P12268 514 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 CHRNA4P43681 627 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 PLK1P53350 603 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 ATP6V0D1P61421 351 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 GPR180Q86V85 440 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 RNF135Q8IUD6 432 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 OR6J1Q8NGC5 347 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 FAM110BQ8TC76 370 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 CALML6Q8TD86 181 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 SENP8Q96LD8 212 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 OSBPL6Q9BZF3 934 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 TRIM15Q9C019 465 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 PLGRKTQ9HBL7 147 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 SMOXQ9NWM0 555 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 CDH7Q9ULB5 785 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 HEMK1Q9Y5R4 338 aaPredicted RBP19.17■□□□□ 0.66
RTN4-201ENST00000317610 NME4O00746 187 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 SMIM10L2AP0DMW4 78 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 SMIM10L2BP0DMW5 78 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 HSD17B1P14061 328 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 LHX1P48742 406 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 STX1BP61266 288 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 EIF4EBP2Q13542 120 aaPredicted RBP19.17■□□□□ 0.66
RTN4-201ENST00000317610 MAP7D1Q3KQU3 841 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 UGT3A2Q3SY77 523 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 ZNF678Q5SXM1 525 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 RWDD4Q6NW29 188 aaKnown RBP19.17■□□□□ 0.66
RTN4-201ENST00000317610 TMEM86AQ8N2M4 240 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 LZTR1Q8N653 840 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 ANKRD49Q8WVL7 239 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 ISOC1Q96CN7 298 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 PHF21BQ96EK2 531 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 C19orf60Q96EN9 201 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 SLC45A3Q96JT2 553 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 FSD1LQ9BXM9 530 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 AGPAT4Q9NRZ5 378 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 MAP10Q9P2G4 905 aa19.17■□□□□ 0.66
RTN4-201ENST00000317610 NYNRINQ9P2P1 1898 aaKnown RBP19.16■□□□□ 0.66
RTN4-201ENST00000317610 PMPCBO75439 489 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 IGLV3-25P01717 112 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 MYL3P08590 195 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 C7P10643 843 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 SLC26A3P40879 764 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 ESRRGP62508 458 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 NFKB2Q00653 900 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 PITRM1Q5JRX3 1037 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 ARTNQ5T4W7 220 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 HECTD2Q5U5R9 776 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 CLEC6AQ6EIG7 209 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 LCN8Q6JVE9 175 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 SPNS2Q8IVW8 549 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 CBR4Q8N4T8 237 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms