RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 LHX3Q9UBR4 397 aa7.04□□□□□ -1.28
LYSMD3-201ENST00000315948 FAM50BQ9Y247 325 aa7.04□□□□□ -1.28
LYSMD3-201ENST00000315948 SH3BP1Q9Y3L3 701 aa7.04□□□□□ -1.28
LYSMD3-201ENST00000315948 KNL1Q8NG31 2342 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 CHD5Q8TDI0 1954 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 G3V2L1 256 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 PPP6CO00743 305 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 TM9SF1O15321 606 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 SERPINF2P08697 491 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 MYL2P10916 166 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 FUT11Q495W5 492 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 PSAPL1Q6NUJ1 521 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 C12orf40Q86WS4 652 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 CACUL1Q86Y37 369 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 SNX31Q8N9S9 440 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 NSMCE1Q8WV22 266 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 C1QTNF1Q9BXJ1 281 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 MAGEH1Q9H213 219 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 FNIP2Q9P278 1114 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 FKBPLQ9UIM3 349 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 ILVBLA1L0T0 632 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 KRT87PA6NCN2 255 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 MROH6A6NGR9 719 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 GFRA2O00451 464 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 DLDP09622 509 aaKnown RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 CBLBQ13191 982 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 THOC5Q13769 683 aaKnown RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 FYB2Q5VWT5 728 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 FSTL5Q8N475 847 aaPredicted RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 GRIN3AQ8TCU5 1115 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 E2F7Q96AV8 911 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 TMEM120AQ9BXJ8 343 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 TDRD1Q9BXT4 1180 aaKnown RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 POLR3BQ9NW08 1133 aaPredicted RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 SIRPGQ9P1W8 387 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 HAO1Q9UJM8 370 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 G3BP2Q9UN86 482 aaKnown RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 RUVBL2Q9Y230 463 aaKnown RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 FIS1Q9Y3D6 152 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 SPRP35270 261 aaPredicted RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 YBEYP58557 167 aaPredicted RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 RHOAP61586 193 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 PRAMEP78395 509 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 ZNF33AQ06730 810 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 ACCSLQ4AC99 568 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 TAF1BQ53T94 588 aaPredicted RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 LY6G5CQ5SRR4 150 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 CILP2Q8IUL8 1156 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 CHST14Q8NCH0 376 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 HEXDCQ8WVB3 486 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 ESAMQ96AP7 390 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 ZNF707Q96C28 371 aaPredicted RBP7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 SORT1Q99523 831 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 PBX4Q9BYU1 374 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 COPG2Q9UBF2 871 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 XPR1Q9UBH6 696 aa7.03□□□□□ -1.28
LYSMD3-201ENST00000315948 ANKRD36A6QL64 1941 aa7.02□□□□□ -1.28
LYSMD3-201ENST00000315948 UBA6A0AVT1 1052 aaPredicted RBP7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 LINC01565O15544 149 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 CLASP2O75122 1294 aaKnown RBP7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 KIAA0754O94854 1291 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 ITGB6P18564 788 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 HTR7P34969 479 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 NRIP1P48552 1158 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 KPNA1P52294 538 aaPredicted RBP7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 AQP5P55064 265 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 GRTP1Q5TC63 336 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 PDPK2PQ6A1A2 396 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 NLRP9Q7RTR0 991 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 LYSMD3Q7Z3D4 306 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 GLT6D1Q7Z4J2 308 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 TBC1D1Q86TI0 1168 aaPredicted RBP7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 MAPK15Q8TD08 544 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 PHF21BQ96EK2 531 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 SLC45A3Q96JT2 553 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 GPR22Q99680 433 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 NAT9Q9BTE0 207 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 NMUR2Q9GZQ4 415 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 HEY2Q9UBP5 337 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 SEPT3Q9UH03 358 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 GON4LQ3T8J9 2241 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 A0A1B0GTL3 188 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 H3BMM5 538 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 S1PR4O95977 384 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 T-ENOLP0DO92 83 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 ALADP13716 330 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 HNRNPLP14866 589 aaKnown RBP eCLIP7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 MAGEA10P43363 369 aaPredicted RBP7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 OCRLQ01968 901 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 UBAP2LQ14157 1087 aaKnown RBP7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 TUBB8Q3ZCM7 444 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 LGSNQ5TDP6 509 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 Q6ZVU0 165 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 CYS1Q717R9 158 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 CLEC14AQ86T13 490 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 ITIH5Q86UX2 942 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 CLDN19Q8N6F1 224 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 ZNF781Q8N8C0 355 aa7.02□□□□□ -1.29
LYSMD3-201ENST00000315948 C2CD4AQ8NCU7 369 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms