RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GRIK2Q13002 908 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ARHGEF18Q6ZSZ5 1173 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PTAR1Q7Z6K3 402 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FAM174AQ8TBP5 190 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SPOCK2Q92563 424 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RMDN1Q96DB5 314 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PBKQ96KB5 322 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NSMCE3Q96MG7 304 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SPATA13Q96N96 652 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NAP1L3Q99457 506 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FSD1LQ9BXM9 530 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GBA3Q9H227 469 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C10orf88Q9H8K7 445 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 EBF2Q9HAK2 575 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CAPN10Q9HC96 672 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TMEM9BQ9NQ34 198 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FAM153AQ9UHL3 310 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RPL26L1Q9UNX3 145 aaKnown RBP11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 R3HDM2Q9Y2K5 976 aaKnown RBP11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZKSCAN5Q9Y2L8 839 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 COQ6Q9Y2Z9 468 aa11.05□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MYLKQ15746 1914 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 A0A0J9YYE9 177 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 A0A1B0GVT2 93 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CAPN8A6NHC0 703 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 A8MX80 341 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C10orf142B7Z368 130 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FPGTO14772 594 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 VILLO15195 856 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LIASO43766 372 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FZD6O60353 706 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PMPCBO75439 489 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ANXA9O76027 345 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PAK4O96013 591 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MT-CYBP00156 380 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TRBC1P01850 177 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ATP1A1P05023 1023 aaKnown RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MMP2P08253 660 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PDHA1P08559 390 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZNF30P17039 623 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ITIH2P19823 946 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TGM1P22735 817 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CD68P34810 354 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CSNK1EP49674 416 aaKnown RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LIG3P49916 1009 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GEMP55040 296 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GNG11P61952 73 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SEMG2Q02383 582 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 OVGP1Q12889 678 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 RALGDSQ12967 914 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MPP3Q13368 585 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GALNT3Q14435 633 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ACOX1Q15067 660 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ANKRD20A2Q5SQ80 823 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ANKRD20A1Q5TYW2 823 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ANKRD20A3Q5VUR7 823 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 DENND2CQ68D51 928 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LAYNQ6UX15 382 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KYAT3Q6YP21 454 aaKnown RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IQCHQ86VS3 1027 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MFSD2AQ8NA29 543 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SPATA22Q8NHS9 363 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C1orf216Q8TAB5 229 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLC35B2Q8TB61 432 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CCDC110Q8TBZ0 833 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NETO1Q8TDF5 533 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PIH1D2Q8WWB5 315 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C1orf54Q8WWF1 131 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ASB12Q8WXK4 309 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ATG4AQ8WYN0 398 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TRIM44Q96DX7 344 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SCRN2Q96FV2 425 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KLHDC7BQ96G42 594 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LENG8Q96PV6 779 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FCRL5Q96RD9 977 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 OSBPL9Q96SU4 736 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ORAI3Q9BRQ5 295 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TMEM121Q9BTD3 319 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MLPHQ9BV36 600 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FSCN3Q9NQT6 498 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 HOMER3Q9NSC5 361 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KCTD5Q9NXV2 234 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 UBP1Q9NZI7 540 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZNF148Q9UQR1 794 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ANKRD6Q9Y2G4 727 aa11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 AAR2Q9Y312 384 aaKnown RBP11.04□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NPIPB15A6NHN6 443 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PSMD11O00231 422 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PCCBP05166 539 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ALPIP09923 528 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TCP1P17987 556 aaKnown RBP11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SDHBP21912 280 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PSMB4P28070 264 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms