RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RCN2Q14257 317 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 TYSND1Q2T9J0 566 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 NCEH1Q6PIU2 408 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 NAPRTQ6XQN6 538 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 ATG14Q6ZNE5 492 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 C16orf59Q7L2K0 433 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 RTL10Q7L3V2 364 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 ARL14EPQ8N8R7 260 aaPredicted RBP19.5■□□□□ 0.71
HOXC4-201ENST00000303406 UTP4Q969X6 686 aaKnown RBP19.5■□□□□ 0.71
HOXC4-201ENST00000303406 DNAJC1Q96KC8 554 aaKnown RBP19.5■□□□□ 0.71
HOXC4-201ENST00000303406 UBXN10Q96LJ8 280 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 RILPQ96NA2 401 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 SLC22A12Q96S37 553 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 BTBD10Q9BSF8 475 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 CCDC106Q9BWC9 280 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 TBC1D10AQ9BXI6 508 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 ADGRE3Q9BY15 652 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 INTS10Q9NVR2 710 aaKnown RBP19.5■□□□□ 0.71
HOXC4-201ENST00000303406 PNPOQ9NVS9 261 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 ACTL7AQ9Y615 435 aa19.5■□□□□ 0.71
HOXC4-201ENST00000303406 CCDC162PA2VCL2 907 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 SLCO1B7G3V0H7 640 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 AURKAO14965 403 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 CD3EAPO15446 510 aaKnown RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 TMCC1O94876 653 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 GOT2P00505 430 aaKnown RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 PRLP01236 227 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 ADH1AP07327 375 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 LTA4HP09960 611 aaKnown RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 ESRRAP11474 423 aaPredicted RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 ATP5F1P24539 256 aaPredicted RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 GABRR2P28476 465 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 SUOXP51687 545 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 PRKAA1Q13131 559 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 ZNF789Q5FWF6 425 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 TECRLQ5HYJ1 363 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 TXNDC8Q6A555 127 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 KLC3Q6P597 504 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 AFTPHQ6ULP2 937 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 SDCCAG8Q86SQ7 713 aaPredicted RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 TTC7BQ86TV6 843 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 CARNMT1Q8N4J0 409 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 OR4L1Q8NH43 312 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 HEXDCQ8WVB3 486 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 USP13Q92995 863 aaPredicted RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 ALG14Q96F25 216 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 TCF12Q99081 682 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 OLFM1Q99784 485 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 EBF4Q9BQW3 602 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 FEM1AQ9BSK4 669 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 ILKAPQ9H0C8 392 aaPredicted RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 CATSPERZQ9NTU4 200 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 HACD3Q9P035 362 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 CPSF2Q9P2I0 782 aaKnown RBP19.49■□□□□ 0.71
HOXC4-201ENST00000303406 LHX3Q9UBR4 397 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 LZTS1Q9Y250 596 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 KCTD3Q9Y597 815 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 RAI2Q9Y5P3 530 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 IRAK3Q9Y616 596 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 ARL5AQ9Y689 179 aa19.49■□□□□ 0.71
HOXC4-201ENST00000303406 CEP350Q5VT06 3117 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 DLX3O60479 287 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 AOC1P19801 751 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 FDXRP22570 491 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 GRIA4P48058 902 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 IDH3AP50213 366 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 PFKPQ01813 784 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 PPIGQ13427 754 aaKnown RBP eCLIP19.48■□□□□ 0.71
HOXC4-201ENST00000303406 ACAP2Q15057 778 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 MAVSQ7Z434 540 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 METTL3Q86U44 580 aaKnown RBP19.48■□□□□ 0.71
HOXC4-201ENST00000303406 ELMOD1Q8N336 334 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 PRR11Q96HE9 360 aaPredicted RBP19.48■□□□□ 0.71
HOXC4-201ENST00000303406 CDKN2AIPNLQ96HQ2 116 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 NSMCE3Q96MG7 304 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 GCNAQ96QF7 691 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 CYP2S1Q96SQ9 504 aa19.48■□□□□ 0.71
HOXC4-201ENST00000303406 MARCH4Q9P2E8 410 aaPredicted RBP19.48■□□□□ 0.71
HOXC4-201ENST00000303406 C2orf81A6NN90 581 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 PENKP01210 267 aaPredicted RBP19.47■□□□□ 0.71
HOXC4-201ENST00000303406 AP1S1P61966 158 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 ZNF460Q14592 562 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 METTL21CQ5VZV1 264 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 EPGNQ6UW88 154 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 GAREM2Q75VX8 874 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 PIWIL4Q7Z3Z4 852 aaKnown RBP19.47■□□□□ 0.71
HOXC4-201ENST00000303406 TDRD5Q8NAT2 981 aaKnown RBP19.47■□□□□ 0.71
HOXC4-201ENST00000303406 OR13C4Q8NGS5 318 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 RMDN1Q96DB5 314 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 C19orf43Q9BQ61 176 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 EMILIN2Q9BXX0 1053 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 MMADHCQ9H3L0 296 aaPredicted RBP19.47■□□□□ 0.71
HOXC4-201ENST00000303406 GPAMQ9HCL2 828 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 VTI1BQ9UEU0 232 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 TAGLN3Q9UI15 199 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 INSL6Q9Y581 213 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 SPO11Q9Y5K1 396 aa19.47■□□□□ 0.71
HOXC4-201ENST00000303406 TRAV19A0A0A6YYK7 116 aa19.46■□□□□ 0.71
HOXC4-201ENST00000303406 CHUKO15111 745 aa19.46■□□□□ 0.71
HOXC4-201ENST00000303406 FGF19O95750 216 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms