RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SAMD7Q7Z3H4 446 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SCUBE3Q8IX30 993 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 GPALPP1Q8IXQ4 340 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 TESCQ96BS2 214 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 PMF1-BGLAPU3KQ54 211 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 USP31Q70CQ4 1352 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ABCG1P45844 678 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 MASP1P48740 699 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 PABPC1LQ4VXU2 614 aaKnown RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 CNSTQ6PJW8 725 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF571Q7Z3V5 609 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 NET1Q7Z628 596 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 MCFD2Q8NI22 146 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ZKSCAN4Q969J2 545 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SLC47A1Q96FL8 570 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ZC3H10Q96K80 434 aaKnown RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 IFT46Q9NQC8 304 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 BTRCQ9Y297 605 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 TRIM38O00635 465 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 RFXANKO14593 260 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 GMFGO60234 142 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 GRK5P34947 590 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 GNALP38405 381 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 OLR1P78380 273 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SLC25A3Q00325 362 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 PEX6Q13608 980 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 TBC1D25Q3MII6 688 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 FBXO6Q9NRD1 293 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ALKBH4Q9NXW9 302 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 TRIM17Q9Y577 477 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 KRT36O76013 467 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 HMGCRP04035 888 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 DNTTP04053 509 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SAGP10523 405 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ATP4AP20648 1035 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 RPS12P25398 132 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ECHS1P30084 290 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ALDH5A1P51649 535 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 NAA20P61599 178 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 PARP6Q2NL67 630 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 WDR59Q6PJI9 974 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CEP68Q76N32 757 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GPR135Q8IZ08 494 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ARL10Q8N8L6 244 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CDYL2Q8N8U2 506 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SLC2A14Q8TDB8 520 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 PPCDCQ96CD2 204 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 HIST1H2AAQ96QV6 131 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MCMBPQ9BTE3 642 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SPATA9Q9BWV2 254 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 IL22Q9GZX6 179 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 POPDC2Q9HBU9 364 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GNEQ9Y223 722 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MFHAS1Q9Y4C4 1052 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 PXDNLA1KZ92 1463 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 METTL21EPA6NDL7 271 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 OR1I1O60431 355 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 LRATO95237 230 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 USP17L7P0C7H9 530 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ABL2P42684 1182 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 AFTPHQ6ULP2 937 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GPRIN3Q6ZVF9 776 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 AMIGO1Q86WK6 493 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TTC29Q8NA56 475 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 DNAJB3Q8WWF6 145 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SIPA1Q96FS4 1042 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MED28Q9H204 178 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SP140LQ9H930 580 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MRPL17Q9NRX2 175 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 PNPLA3Q9NST1 481 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF221Q9UK13 617 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ARL5CA6NH57 179 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 PLOD2O00469 737 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 NKRFO15226 690 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 BUD23O43709 281 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CCNKO75909 580 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 FGBP02675 491 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GLI1P08151 1106 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 COX4I1P13073 169 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ATF6P18850 670 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CD86P42081 329 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CTSKP43235 329 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MAGEA12P43365 314 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TTPAP49638 278 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 NAGLUP54802 743 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 XIAPP98170 497 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ENPEPQ07075 957 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 PAPD7Q5XG87 772 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SMIM5Q71RC9 77 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SV2AQ7L0J3 742 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ATP6V1C2Q8NEY4 427 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TPK1Q9H3S4 243 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 BRD9Q9H8M2 597 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 BPIFA1Q9NP55 256 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MARCH2Q9P0N8 246 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MLXQ9UH92 298 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CPS1P31327 1500 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CDC42BPGQ6DT37 1551 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms