RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ZCCHC23Q6ZST2 131 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 ADGRD2Q7Z7M1 963 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 C10orf107Q8IVU9 208 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 LMNTD2Q8IXW0 634 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 TNS4Q8IZW8 715 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 GPR150Q8NGU9 434 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 CDKN2AIPNLQ96HQ2 116 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 C20orf27Q9GZN8 174 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 ABCB8Q9NUT2 735 aa22.38■■□□□ 1.17
SMAD1-201ENST00000302085 FZD6O60353 706 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 PENKP01210 267 aaPredicted RBP22.37■■□□□ 1.17
SMAD1-201ENST00000302085 TROVE2P10155 538 aaKnown RBP eCLIP22.37■■□□□ 1.17
SMAD1-201ENST00000302085 CPA3P15088 417 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 STMN1P16949 149 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 PSMA3P25788 255 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 POU4F1Q01851 419 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 STX3Q13277 289 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 ZNF460Q14592 562 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 PTPRRQ15256 657 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 ASTLQ6HA08 431 aaPredicted RBP22.37■■□□□ 1.17
SMAD1-201ENST00000302085 PDCD6IPQ8WUM4 868 aaKnown RBP22.37■■□□□ 1.17
SMAD1-201ENST00000302085 C7orf26Q96N11 449 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 TM6SF2Q9BZW4 377 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 NMRAL1Q9HBL8 299 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 YBX2Q9Y2T7 364 aaKnown RBP22.37■■□□□ 1.17
SMAD1-201ENST00000302085 ACOT9Q9Y305 439 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 USH1CQ9Y6N9 552 aa22.37■■□□□ 1.17
SMAD1-201ENST00000302085 ANKRD36A6QL64 1941 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 GLP2RO95838 553 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 CRABP2P29373 138 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 HLA-FP30511 346 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 ABL2P42684 1182 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 ZNF77Q15935 545 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 TAF1BQ53T94 588 aaPredicted RBP22.36■■□□□ 1.17
SMAD1-201ENST00000302085 TMEM151AQ8N4L1 468 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 KCTD4Q8WVF5 259 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 ING5Q8WYH8 240 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 SAMD11Q96NU1 681 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 NDNQ99608 321 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 TRIM55Q9BYV6 548 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 CERS4Q9HA82 394 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 RUVBL2Q9Y230 463 aaKnown RBP22.36■■□□□ 1.17
SMAD1-201ENST00000302085 G3V2L1 256 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 CD3EAPO15446 510 aaKnown RBP22.36■■□□□ 1.17
SMAD1-201ENST00000302085 ZNF821O75541 412 aaPredicted RBP22.36■■□□□ 1.17
SMAD1-201ENST00000302085 COL6A2P12110 1019 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 CEBPBP17676 345 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 CTSOP43234 321 aaPredicted RBP22.36■■□□□ 1.17
SMAD1-201ENST00000302085 CLCN5P51795 746 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 AP1S1P61966 158 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 SEMA3AQ14563 771 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 PITRM1Q5JRX3 1037 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 GLT6D1Q7Z4J2 308 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 CENPLQ8N0S6 344 aaPredicted RBP22.36■■□□□ 1.17
SMAD1-201ENST00000302085 FITM2Q8N6M3 262 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 OR4K2Q8NGD2 314 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 OLFM1Q99784 485 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 KCNK13Q9HB14 408 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 DCTN4Q9UJW0 460 aa22.36■■□□□ 1.17
SMAD1-201ENST00000302085 MYOFQ9NZM1 2061 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 DNAJC6O75061 913 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 SLC20A2Q08357 652 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 DLG1Q12959 904 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 CBX2Q14781 532 aaPredicted RBP22.35■■□□□ 1.17
SMAD1-201ENST00000302085 DGKKQ5KSL6 1271 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 OR6K2Q8NGY2 324 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 OR4L1Q8NH43 312 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 PPP1R14CQ8TAE6 165 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 ZNF398Q8TD17 642 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 IRF7Q92985 503 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 GPR78Q96P69 363 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 EVLQ9UI08 416 aaPredicted RBP22.35■■□□□ 1.17
SMAD1-201ENST00000302085 PCDHB9Q9Y5E1 797 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 PDE4DIPQ5VU43 2346 aa22.35■■□□□ 1.17
SMAD1-201ENST00000302085 GBF1Q92538 1859 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 C2orf81A6NN90 581 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 POU2F2P09086 479 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 DLDP09622 509 aaKnown RBP22.34■■□□□ 1.17
SMAD1-201ENST00000302085 CSNK1DP48730 415 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 GALNTL6Q49A17 601 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 LCA5Q86VQ0 697 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 CAMK1DQ8IU85 385 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 ARID3BQ8IVW6 561 aaPredicted RBP22.34■■□□□ 1.17
SMAD1-201ENST00000302085 SPNS2Q8IVW8 549 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 C12orf76Q8N812 135 aaPredicted RBP22.34■■□□□ 1.17
SMAD1-201ENST00000302085 ITFG1Q8TB96 612 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 THAP1Q9NVV9 213 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 NEDD8-MDP1E9PL57 170 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 ZNF197O14709 1029 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 ITM2AO43736 263 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 UBOX5O94941 541 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 SBK3P0C264 359 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 PBX2P40425 430 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 USP4Q13107 963 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 FUT11Q495W5 492 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 TTC30BQ8N4P2 665 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 EFHBQ8N7U6 833 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 NXNL1Q96CM4 212 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 RPL10LQ96L21 214 aaKnown RBP22.34■■□□□ 1.17
SMAD1-201ENST00000302085 BBS2Q9BXC9 721 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms