RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PIWIL4Q7Z3Z4 852 aaKnown RBP13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 LINC00523Q86TU6 105 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 TMEM135Q86UB9 458 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 ERO1BQ86YB8 467 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 ARRDC4Q8NCT1 418 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 GPRC5AQ8NFJ5 357 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 PLEKHG4BQ96PX9 1271 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 ACOX2Q99424 681 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 RIMS3Q9UJD0 308 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 NOD1Q9Y239 953 aa13.37□□□□□ -0.27
TNFRSF21-201ENST00000296861 A8MT66 165 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 GSTA4O15217 222 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 ANXA9O76027 345 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 IPO13O94829 963 aaKnown RBP13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 FMO4P31512 558 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SULT2A1Q06520 285 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 CHSY3Q70JA7 882 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 KDM1BQ8NB78 822 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 NUDT8Q8WV74 236 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 ANKRD49Q8WVL7 239 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 NCSTNQ92542 709 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 PPM1MQ96MI6 270 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 NPY6RQ99463 290 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 OLFM1Q99784 485 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SLC39A8Q9C0K1 460 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 RHOBTB1O94844 696 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 H6PDO95479 791 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 ALDH4A1P30038 563 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 DAOAP59103 153 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 PIGFQ07326 219 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 ITGADQ13349 1161 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 MARVELD2Q8N4S9 558 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 ARL10Q8N8L6 244 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 CCDC97Q96F63 343 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SLC25A23Q9BV35 468 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 AFF4Q9UHB7 1163 aaKnown RBP13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SLCO1B7G3V0H7 640 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 PIP5K1BO14986 540 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 PAGE1O75459 146 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 GJB3O75712 270 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 HLA-DQB2P05538 268 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SMIM10L2AP0DMW4 78 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SMIM10L2BP0DMW5 78 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SMPD1P17405 629 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 EDNRBP24530 442 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 DIO3P55073 304 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SH3D19Q5HYK7 790 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 OGFOD2Q6N063 350 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 LSMEM2Q8N112 164 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 FBXO30Q8TB52 745 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 CDK15Q96Q40 435 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 GPR22Q99680 433 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 SMOQ99835 787 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 MRPL57Q9BQC6 102 aaKnown RBP13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 GLOD4Q9HC38 313 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 USP22Q9UPT9 525 aa13.36□□□□□ -0.27
TNFRSF21-201ENST00000296861 MAGEB16A2A368 324 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 TBX18O95935 607 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 PENKP01210 267 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 LTA4HP09960 611 aaKnown RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 HADHAP40939 763 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 HSPA13P48723 471 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 APLP1P51693 650 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 GNA12Q03113 381 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 KYAT1Q16773 422 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 ANKRD13AQ8IZ07 590 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 LRRC52Q8N7C0 313 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 DQX1Q8TE96 717 aaKnown RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 SENP6Q9GZR1 1112 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 BPIFA1Q9NP55 256 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 CRTAC1Q9NQ79 661 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 TRHDEQ9UKU6 1024 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 PAIP2BQ9ULR5 123 aaKnown RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 RBMX2Q9Y388 322 aaKnown RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 GREB1LQ9C091 1923 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 NUP214P35658 2090 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 TTC3P53804 2025 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 MOXD2PA6NHM9 499 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 A8MX80 341 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 DCLK1O15075 740 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 GUCA1CO95843 209 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 CDH2P19022 906 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 PKDCCQ504Y2 493 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 TAS2R42Q7RTR8 314 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 GABPB2Q8TAK5 448 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 STYXQ8WUJ0 223 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 FIG4Q92562 907 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 DLG3Q92796 817 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 RPRD1AQ96P16 312 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 NAA50Q9GZZ1 169 aaKnown RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 UNC93B1Q9H1C4 597 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 CLK4Q9HAZ1 481 aaKnown RBP13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 CASS4Q9NQ75 786 aa13.35□□□□□ -0.27
TNFRSF21-201ENST00000296861 ZNF112Q9UJU3 913 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms