RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 IVDP26440 423 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 POLR2LP62875 67 aaKnown RBP13.5□□□□□ -0.25
HPS3-201ENST00000296051 SETMARQ53H47 684 aaPredicted RBP13.5□□□□□ -0.25
HPS3-201ENST00000296051 NOL9Q5SY16 702 aaKnown RBP13.5□□□□□ -0.25
HPS3-201ENST00000296051 IRAK1BP1Q5VVH5 260 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 SPPL2CQ8IUH8 684 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 TAGAPQ8N103 731 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 COQ10BQ9H8M1 238 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 MRGBPQ9NV56 204 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 GRM5P41594 1212 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 FPGSQ05932 587 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ZNF554Q86TJ5 538 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ATG16L2Q8NAA4 619 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 KLHL23Q8NBE8 558 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 TRPC4APQ8TEL6 797 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 OR52B2Q96RD2 323 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 RGS18Q9NS28 235 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 NDRG2Q9UN36 371 aaKnown RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 TBL1XO60907 577 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 NOS2P35228 1153 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ARMC12Q5T9G4 340 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 NANOGNBQ7Z5D8 188 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ZDHHC17Q8IUH5 632 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 SLC44A2Q8IWA5 706 aaPredicted RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 CBR4Q8N4T8 237 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 DCBLD1Q8N8Z6 715 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ADCY4Q8NFM4 1077 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 EXOC2Q96KP1 924 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 SPACA7Q96KW9 195 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ACOX2Q99424 681 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 PRPF19Q9UMS4 504 aaKnown RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 SPACA6W5XKT8 324 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 DUOX1Q9NRD9 1551 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 DHRS12A0PJE2 317 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 NCAM2O15394 837 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 GUCA1CO95843 209 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 POU1F1P28069 291 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 SERPINA4P29622 427 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 SIX1Q15475 284 aaPredicted RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 LIPMQ5VYY2 423 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 CGB2Q6NT52 195 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 PCDH19Q8TAB3 1148 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 OTUB1Q96FW1 271 aaPredicted RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 C1orf50Q9BV19 199 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 OSBPL11Q9BXB4 747 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 CLASP2O75122 1294 aaKnown RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 KLHDC10Q6PID8 442 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ENDOVQ8N8Q3 282 aaKnown RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 ZNF296Q8WUU4 475 aaPredicted RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 CAPSLQ8WWF8 208 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ELMO1Q92556 727 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 FAM210AQ96ND0 272 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 SMAD5Q99717 465 aaKnown RBP13.49□□□□□ -0.25
HPS3-201ENST00000296051 TCF25Q9BQ70 676 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 C1QTNF7Q9BXJ2 289 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ABCB10Q9NRK6 738 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 ARHGAP28Q9P2N2 729 aa13.49□□□□□ -0.25
HPS3-201ENST00000296051 GPC1P35052 558 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 JAG1P78504 1218 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 TAF10Q12962 218 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 CBX3Q13185 183 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 OLIG2Q13516 323 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 SPESP1Q6UW49 350 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 ZDHHC13Q8IUH4 622 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 NXNL1Q96CM4 212 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 DNAAF2Q9NVR5 837 aaKnown RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 U3KQV3 271 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 NEMP2A6NFY4 417 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 OR6C75A6NL08 312 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 KPNA4O00629 521 aaPredicted RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 ARHGEF9O43307 516 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 DNAJA2O60884 412 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 HGFP14210 728 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 CDH2P19022 906 aaPredicted RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 RSBN1Q5VWQ0 802 aaPredicted RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 EGFLAMQ63HQ2 1017 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 PMF1Q6P1K2 205 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 OR8H2Q8N162 312 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 SPPL2BQ8TCT7 592 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 RORBQ92753 470 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 CSPG4P5Q96PW8 444 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 SSU72Q9NP77 194 aaKnown RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 CLDND1Q9NY35 253 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 KANSL1LA0AUZ9 987 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 NRP2O60462 931 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 FOXD2O60548 495 aaPredicted RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 CDH3P22223 829 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 HPCAP84074 193 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 SEMA5AQ13591 1074 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 CLEC6AQ6EIG7 209 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 CENPLQ8N0S6 344 aaPredicted RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 LZTR1Q8N653 840 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 ZNF670Q9BS34 389 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 REXO4Q9GZR2 422 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms