RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ZNF606Q8WXB4 792 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 PCDHB16Q9NRJ7 776 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 ZSCAN32Q9NX65 697 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 NUDT5Q9UKK9 219 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 DNPEPQ9ULA0 475 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.73□□□□□ -1.49
VCAN-201ENST00000265077 KNDC1Q76NI1 1749 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 C1orf167Q5SNV9 1468 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 NUAK1O60285 661 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 NTSR2O95665 410 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 JCHAINP01591 159 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 GPC1P35052 558 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 PKNOX1P55347 436 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 ANKS6Q68DC2 871 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 C11orf88Q6PI97 169 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 LRRC55Q6ZSA7 311 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 KCTD8Q6ZWB6 473 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 STK40Q8N2I9 435 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 TRUB1Q8WWH5 349 aaKnown RBP5.73□□□□□ -1.49
VCAN-201ENST00000265077 CLIP3Q96DZ5 547 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 Q96MT0 163 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 GAL3ST1Q99999 423 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 KLHL28Q9NXS3 571 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 TAS2R13Q9NYV9 303 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.73□□□□□ -1.49
VCAN-201ENST00000265077 HSPB11Q9Y547 144 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 DYRK3O43781 588 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 KDM4BO94953 1096 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 ALDH6A1Q02252 535 aaKnown RBP5.73□□□□□ -1.49
VCAN-201ENST00000265077 SNAPC2Q13487 334 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 DPYSL3Q14195 570 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 PYDC2Q56P42 97 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 IQSEC1Q6DN90 963 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 MPP5Q8N3R9 675 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 LIN28AQ9H9Z2 209 aaKnown RBP5.73□□□□□ -1.49
VCAN-201ENST00000265077 WDR41Q9HAD4 459 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 RPS6KA6Q9UK32 745 aa5.73□□□□□ -1.49
VCAN-201ENST00000265077 IL18R1Q13478 541 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 E2F2Q14209 437 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 USP39Q53GS9 565 aaKnown RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 C10orf120Q5SQS8 335 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 OTUD3Q5T2D3 398 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 ZNF470Q6ECI4 717 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 ZNF572Q7Z3I7 529 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 HS6ST3Q8IZP7 471 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 FBXO39Q8N4B4 442 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 AGBL3Q8NEM8 1001 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 SSX3Q99909 188 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 GBA3Q9H227 469 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 FBXO44Q9H4M3 255 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 PNPLA8Q9NP80 782 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 LMO7Q8WWI1 1683 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 UNCXA6NJT0 531 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 SIGLEC16A6NMB1 481 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 ZW10O43264 779 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 KCNH1O95259 989 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 ECDO95905 644 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 UGT2B4P06133 528 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 PLEKHG6Q3KR16 790 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 UTP15Q8TED0 518 aaKnown RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 PHF21BQ96EK2 531 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 FAM120BQ96EK7 910 aaKnown RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 TMEM109Q9BVC6 243 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 RFPL2O75678 378 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 NTRK1P04629 796 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 IL7P13232 177 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 GLRA2P23416 452 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 ATP5F1P24539 256 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 PKLRP30613 574 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 PCDH1Q08174 1060 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 FAAP100Q0VG06 881 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 CAMK2GQ13555 558 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 GPR162Q16538 588 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 UBE2UQ5VVX9 321 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 CENPIQ92674 756 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 ART4Q93070 314 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 ERMAPQ96PL5 475 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 PAQR5Q9NXK6 330 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 GLS2Q9UI32 602 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 FAM205AQ6ZU69 1335 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 FAM25EA8MYX2 175 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 H7C4K7 107 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 SLC22A1O15245 554 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 YKT6O15498 198 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 MAGP20916 626 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 PDHA2P29803 388 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 NKX2-5P52952 324 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 VWA5B1Q5TIE3 1220 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 CASP12Q6UXS9 341 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 EPB41L4BQ9H329 900 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 MUC13Q9H3R2 512 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 IFT22Q9H7X7 185 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 TCRBV5S4A2TA0A5A2 114 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 KRBA1A5PL33 1030 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 PAICSP22234 425 aaKnown RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 HPCAL1P37235 193 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 SHROOM1Q2M3G4 852 aaPredicted RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 TYW3Q6IPR3 259 aaKnown RBP5.72□□□□□ -1.49
VCAN-201ENST00000265077 DPY19L3Q6ZPD9 716 aa5.72□□□□□ -1.49
VCAN-201ENST00000265077 SEPT5Q99719 369 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms