RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SHHQ15465 462 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 C6orf163Q5TEZ5 329 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 DCAF4L2Q8NA75 395 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 OR52K2Q8NGK3 314 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 STYXQ8WUJ0 223 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 PRICKLE1Q96MT3 831 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 ZFYVE1Q9HBF4 777 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 RXFP1Q9HBX9 757 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 HACD3Q9P035 362 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 DEC1Q9P2X7 70 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 HEY2Q9UBP5 337 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 MAFFQ9ULX9 164 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 ANKRD66B4E2M5 251 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 MYO1CO00159 1063 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 TRIM13O60858 407 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 PIGNO95427 931 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ADH1CP00326 375 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 GMPRP36959 345 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 VIPR2P41587 438 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 AQP5P55064 265 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 TAS2R39P59534 338 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ATAT1Q5SQI0 421 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 KIAA0930Q6ICG6 404 aaPredicted RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 SERPINA13PQ6UXR4 307 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 LEMD2Q8NC56 503 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 CYB5D2Q8WUJ1 264 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ZFYVE19Q96K21 471 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ACE2Q9BYF1 805 aaPredicted RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 NKX2-4Q9H2Z4 354 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 DNMT3BQ9UBC3 853 aaKnown RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 BAIAP2L1Q9UHR4 511 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 CCL26Q9Y258 94 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 IGLV3-10A0A075B6K4 115 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 CCDC162PA2VCL2 907 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 PDHA1P08559 390 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 SLC1A6P48664 564 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 PPM1FP49593 454 aaPredicted RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 POLR2LP62875 67 aaKnown RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 UBE3AQ05086 875 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 RASA2Q15283 850 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 USP45Q70EL2 814 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 OTOAQ7RTW8 1153 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 SPRED2Q7Z698 418 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 METTL3Q86U44 580 aaKnown RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 C10orf107Q8IVU9 208 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 AGGF1Q8N302 714 aaeCLIP9.35□□□□□ -0.91
SSR3-201ENST00000265044 SHKBP1Q8TBC3 707 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 PPM1EQ8WY54 764 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 HERVK_113Q902F9 699 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 IRF7Q92985 503 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 XPR1Q9UBH6 696 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 FKBPLQ9UIM3 349 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 HTTP42858 3142 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ZCWPW2A0A1B0GU75 182 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 DDX6P26196 483 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSR3-201ENST00000265044 CD70P32970 193 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 DGKGP49619 791 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 CLCN5P51795 746 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 AP1S1P61966 158 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ECT2LQ008S8 904 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 KDSRQ06136 332 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 FAM109BQ6ICB4 259 aaPredicted RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 CDHR3Q6ZTQ4 885 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 Q6ZVU0 165 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 MTDHQ86UE4 582 aaKnown RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 NXNL1Q96CM4 212 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ILKAPQ9H0C8 392 aaPredicted RBP9.35□□□□□ -0.91
SSR3-201ENST00000265044 EBF3Q9H4W6 596 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 ALG9Q9H6U8 611 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 TXLNGQ9NUQ3 528 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 THAP1Q9NVV9 213 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 SLCO3A1Q9UIG8 710 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 MOSPD1Q9UJG1 213 aa9.35□□□□□ -0.91
SSR3-201ENST00000265044 SLC7A4O43246 635 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 TYROBPO43914 113 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 SERPINE1P05121 402 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 HNRNPA1P09651 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
SSR3-201ENST00000265044 GRK2P25098 689 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 RGRP47804 291 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 IRF9Q00978 393 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 SULT2A1Q06520 285 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 TSNAXIP1Q2TAA8 658 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 TRIM68Q6AZZ1 485 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 AFTPHQ6ULP2 937 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 CDKN2AIPNLQ96HQ2 116 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ECT2Q9H8V3 914 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ACTR5Q9H9F9 607 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 CD274Q9NZQ7 290 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 A0A0U1RQS6 177 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 TK2O00142 265 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 RFXAPO00287 272 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 CLGNO14967 610 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 MUSKO15146 869 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 EDF1O60869 148 aaKnown RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 LYPLA1O75608 230 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 RFPL1O75677 317 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 IL1BP01584 269 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 IGLV3-27P01718 113 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms