RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ERCC2P18074 760 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 ZNF135P52742 658 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 INHBCP55103 352 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 CFHR1Q03591 330 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 TYRO3Q06418 890 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 MAMLD1Q13495 774 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 ALG11Q2TAA5 492 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 TDRD12Q587J7 1177 aaKnown RBP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 ARTNQ5T4W7 220 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 CCDC81Q6ZN84 652 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 KYQ8NBH2 561 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 TSEN2Q8NCE0 465 aaKnown RBP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 FAM46DQ8NEK8 389 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 OR56A4Q8NGH8 313 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 TMEM74Q96NL1 305 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 SNRNP25Q9BV90 132 aaKnown RBP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 CLPBQ9H078 707 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 LRRC19Q9H756 370 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 TAS2R14Q9NYV8 317 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 MYO6Q9UM54 1294 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 PCDHGA8Q9Y5G5 932 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 ASXL3Q9C0F0 2248 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 NBEAQ8NFP9 2946 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 DOCK4Q8N1I0 1966 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 B4DGG1 531 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 ERVH48-1M5A8F1 160 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 RECQL5O94762 991 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 ATP1A3P13637 1013 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 MMP12P39900 470 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 CSNK1DP48730 415 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 AP1S1P61966 158 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 IL10RBQ08334 325 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 LBRQ14739 615 aaKnown RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 ANO6Q4KMQ2 910 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 TMCO4Q5TGY1 634 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 CLEC17AQ6ZS10 378 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 RAB11FIP2Q7L804 512 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 NDUFAF2Q8N183 169 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 LZTR1Q8N653 840 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 KIAA1524Q8TCG1 905 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 HSPH1Q92598 858 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 HIC2Q96JB3 615 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 SLC46A1Q96NT5 459 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 KCTD15Q96SI1 283 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 WDR26Q9H7D7 661 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 CYP4F12Q9HCS2 524 aa12.31□□□□□ -0.44
TRAF4-202ENST00000262396 ARID1BQ8NFD5 2236 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-202ENST00000262396 CELSR3Q9NYQ7 3312 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 A0A1W2PQ67 120 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 TSPAN11A1L157 253 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 CFAP69A5D8W1 941 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 LRRC10BA6NIK2 292 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 PLD2O14939 933 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 BUB1BO60566 1050 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-202ENST00000262396 MYBL1P10243 752 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 CYP2A6P11509 494 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-202ENST00000262396 MIPP30301 263 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-202ENST00000262396 CCL7P80098 99 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 OGDHQ02218 1023 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 ITKQ08881 620 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 NSUN2Q08J23 767 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAF4-202ENST00000262396 EIF3IQ13347 325 aaKnown RBP12.3□□□□□ -0.44
TRAF4-202ENST00000262396 KRT81Q14533 505 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 CA9Q16790 459 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 MAP9Q49MG5 647 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 TMCO3Q6UWJ1 677 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 IRF2BP2Q7Z5L9 587 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 CCNJLQ8IV13 435 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 PSTKQ8IV42 348 aaKnown RBP12.3□□□□□ -0.44
TRAF4-202ENST00000262396 ATPAF2Q8N5M1 289 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 FOXP3Q9BZS1 431 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 LRRN3Q9H3W5 708 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 PDFQ9HBH1 243 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 ASCL3Q9NQ33 180 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 PHPT1Q9NRX4 125 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-202ENST00000262396 HAUS2Q9NVX0 235 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 PISDQ9UG56 409 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 PCDHB11Q9Y5F2 797 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 MYLKQ15746 1914 aa12.3□□□□□ -0.44
TRAF4-202ENST00000262396 TCRBV5S1A1TA0A578 114 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 TMEM191CA6NGB0 347 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 RHPN2P1A8MT19 583 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 CPP00450 1065 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 SERPINB6P35237 376 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 HSPA9P38646 679 aaKnown RBP12.29□□□□□ -0.44
TRAF4-202ENST00000262396 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 ILF3Q12906 894 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAF4-202ENST00000262396 PEX6Q13608 980 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms