RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 MAN1C1Q9NR34 630 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 VPS45Q9NRW7 570 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
VMP1-201ENST00000262291 CXXC1Q9P0U4 656 aaPredicted RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 ANAPC1Q9H1A4 1944 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 K7ERQ8 282 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 TGM5O43548 720 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 STMN1P16949 149 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 LAG3P18627 525 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 ABCE1P61221 599 aaKnown RBP13.64□□□□□ -0.23
VMP1-201ENST00000262291 CYTH1Q15438 398 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 ATXN7L2Q5T6C5 722 aaPredicted RBP13.64□□□□□ -0.23
VMP1-201ENST00000262291 TPGS2Q68CL5 300 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 OR52E8Q6IFG1 317 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 TPGS1Q6ZTW0 290 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 DDX53Q86TM3 631 aaKnown RBP13.64□□□□□ -0.23
VMP1-201ENST00000262291 EFHBQ8N7U6 833 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 SLC22A17Q8WUG5 538 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 PLD4Q96BZ4 506 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 MYRFLQ96LU7 910 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 CDK5RAP1Q96SZ6 601 aaKnown RBP13.64□□□□□ -0.23
VMP1-201ENST00000262291 GATA5Q9BWX5 397 aaPredicted RBP13.64□□□□□ -0.23
VMP1-201ENST00000262291 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 ARNT2Q9HBZ2 717 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 XPR1Q9UBH6 696 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 FCF1Q9Y324 198 aaKnown RBP13.64□□□□□ -0.23
VMP1-201ENST00000262291 LOC285095A0A1B0GVY8 99 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 HSPA4LO95757 839 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 MT-CO1P00395 513 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 SERPINF2P08697 491 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 RAB10P61026 200 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 SEMA3AQ14563 771 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 INSCQ1MX18 579 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 GAREM2Q75VX8 874 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 CNTN4Q8IWV2 1026 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 FAM13CQ8NE31 585 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 LPCAT1Q8NF37 534 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 FBXO27Q8NI29 283 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 NAT14Q8WUY8 206 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 CYP4F12Q9HCS2 524 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 ACOT9Q9Y305 439 aa13.64□□□□□ -0.23
VMP1-201ENST00000262291 A0A1W2PRU2 124 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CCDC162PA2VCL2 907 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CLDN11O75508 207 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 GOT2P00505 430 aaKnown RBP13.63□□□□□ -0.23
VMP1-201ENST00000262291 F11P03951 625 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CKMP06732 381 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 MPSTP25325 297 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 PLK1P53350 603 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 SLC12A2P55011 1212 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 ARF5P84085 180 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 SLC12A1Q13621 1099 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CCDC153Q494R4 210 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TMEM151AQ8N4L1 468 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CCNYL1Q8N7R7 359 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 ZNF398Q8TD17 642 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 HEXDCQ8WVB3 486 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TBC1D10AQ9BXI6 508 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TM6SF2Q9BZW4 377 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 IL21Q9HBE4 155 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 BPIFA1Q9NP55 256 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 SCUBE2Q9NQ36 999 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 HCFC1R1Q9NWW0 138 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 WBP1LQ9NX94 342 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CLEC4EQ9ULY5 219 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 GOLGA8CPA6NN73 597 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 KDELR3O43731 214 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 COQ9O75208 318 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 NAGLUP54802 743 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CDKN2DP55273 166 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 KDSRQ06136 332 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 LRRC8EQ6NSJ5 796 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 RINLQ6ZS11 566 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TMC7Q7Z402 723 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 PIWIL2Q8TC59 973 aaKnown RBP13.63□□□□□ -0.23
VMP1-201ENST00000262291 PPP4R1Q8TF05 950 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TADA1Q96BN2 335 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TSNARE1Q96NA8 513 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 PPP1R2P1Q96PQ5 205 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 MIPEPQ99797 713 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 DDX50Q9BQ39 737 aaKnown RBP13.63□□□□□ -0.23
VMP1-201ENST00000262291 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 FAM96AQ9H5X1 160 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 KCNK4Q9NYG8 393 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 SEPT3Q9UH03 358 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 hCG_2014768A0A024R1R8 64 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 GOLGA8QA0A0J9YX86 632 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 A0A1B0GVM2 712 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 LCHNA4D1U4 455 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 GOLGA8OA6NCC3 632 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TCAF2A6NFQ2 919 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 MROH6A6NGR9 719 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 GOLGA8NF8WBI6 632 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CCL16O15467 120 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 GPR39O43194 453 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CXCL14O95715 111 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CD160O95971 181 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 MYL4P12829 197 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms