RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 EID2BQ96D98 161 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 WDR55Q9H6Y2 383 aaPredicted RBP9.24□□□□□ -0.93
RPA1-201ENST00000254719 VPS45Q9NRW7 570 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 TRMT13Q9NUP7 481 aaKnown RBP9.24□□□□□ -0.93
RPA1-201ENST00000254719 RIC8BQ9NVN3 520 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 NEMP2A6NFY4 417 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 E5RI56 91 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 MOCS2O96007 188 aaPredicted RBP9.24□□□□□ -0.93
RPA1-201ENST00000254719 ETFBP38117 255 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 RAD51Q06609 339 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 DDI1Q8WTU0 396 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 STYXQ8WUJ0 223 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 SMARCD1Q96GM5 515 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 ATXN7L3BQ96GX2 97 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 B3GALT6Q96L58 329 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 ASB2Q96Q27 587 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 PCDHB12Q9Y5F1 795 aa9.24□□□□□ -0.93
RPA1-201ENST00000254719 A0A0U1RQS6 177 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 IRAK2O43187 625 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 SRP72O76094 671 aaKnown RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 TBX18O95935 607 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 GFAPP14136 432 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 ATP6V1B1P15313 513 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 MPSTP25325 297 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 SGSHP51688 502 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 ARHGDIAP52565 204 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 ARPP19P56211 112 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 CACNB2Q08289 660 aaPredicted RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 PDAP1Q13442 181 aaKnown RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 SDHAF4Q5VUM1 108 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 CHSY3Q70JA7 882 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 TEX26Q8N6G2 289 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 RDH11Q8TC12 318 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 RSPH1Q8WYR4 309 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 C3orf30Q96M34 536 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 CCDC138Q96M89 665 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 CDK5RAP1Q96SZ6 601 aaKnown RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 IL22Q9GZX6 179 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 MARCH4Q9P2E8 410 aaPredicted RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 PTCH2Q9Y6C5 1203 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 A0A0U1RQF3 1178 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 ANKRD33BA6NCL7 494 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 TRPA1O75762 1119 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 SOAT2O75908 522 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 POMCP01189 267 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 MTHFD2P13995 350 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 CDKN2DP55273 166 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 TMED1Q13445 227 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 TRIP10Q15642 601 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 UGT3A1Q6NUS8 523 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 IRGCQ6NXR0 463 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 ELMSAN1Q6PJG2 1045 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 TAS1R1Q7RTX1 841 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 GALNT15Q8N3T1 639 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 IPMKQ8NFU5 416 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 KLHL32Q96NJ5 620 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 OMDQ99983 421 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 UBAP1Q9NZ09 502 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 GALPQ9UBC7 116 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 KCTD3Q9Y597 815 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 COL4A3Q01955 1670 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 RNF103-CHMP3A0A140T963 221 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 DYTNA2CJ06 578 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 STX16-NPEPL1H3BU86 382 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 FGF10O15520 208 aaPredicted RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 AHCYL1O43865 530 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 GREM1O60565 184 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 PFDN1O60925 122 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 NDUFS3O75489 264 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 F11P03951 625 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 CPB1P15086 417 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 TPP2P29144 1249 aaPredicted RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 SLC1A2P43004 574 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 CTBP1Q13363 440 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 SLC12A1Q13621 1099 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 ITGA9Q13797 1035 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 INTS6LQ5JSJ4 861 aaKnown RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 AARS2Q5JTZ9 985 aaKnown RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 UNKQ9C0B0 810 aaKnown RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 CACYBPQ9HB71 228 aaKnown RBP9.23□□□□□ -0.93
RPA1-201ENST00000254719 MPP6Q9NZW5 540 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 ASB1Q9Y576 335 aa9.23□□□□□ -0.93
RPA1-201ENST00000254719 KIAA1549LQ6ZVL6 1849 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 CCDC78A2IDD5 438 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 LDB2O43679 373 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 TADA2AO75478 443 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 CELF2O95319 508 aaKnown RBP9.22□□□□□ -0.93
RPA1-201ENST00000254719 CCR1P32246 355 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 HTR7P34969 479 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 RENBPP51606 427 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 ELAVL2Q12926 359 aaKnown RBP9.22□□□□□ -0.93
RPA1-201ENST00000254719 PPP1R3AQ16821 1122 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 LPCAT4Q643R3 524 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 HPS6Q86YV9 775 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 FAM9CQ8IZT9 166 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 FSTL5Q8N475 847 aaPredicted RBP9.22□□□□□ -0.93
RPA1-201ENST00000254719 GDPD5Q8WTR4 605 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 CNDP1Q96KN2 507 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 TRIB3Q96RU7 358 aa9.22□□□□□ -0.93
RPA1-201ENST00000254719 FBXO44Q9H4M3 255 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms