RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PTERQ96BW5 349 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 IL1RL2Q9HB29 575 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 MRM3Q9HC36 420 aaKnown RBP25.66■■□□□ 1.7
RAB40C-201ENST00000248139 CACNA2D2Q9NY47 1150 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 ARL5AQ9Y689 179 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 NLRC5Q86WI3 1866 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 PRORSD1PA6NEY8 169 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 TRPA1O75762 1119 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 SMIM18P0DKX4 95 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 NELFEP18615 380 aaKnown RBP25.65■■□□□ 1.7
RAB40C-201ENST00000248139 ARPP19P56211 112 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 DNAJB13P59910 316 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 REP15Q6BDI9 236 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 ATAD1Q8NBU5 361 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 BLOC1S5Q8TDH9 187 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 LRCH3Q96II8 777 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 GSTO2Q9H4Y5 243 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 TRMT13Q9NUP7 481 aaKnown RBP25.65■■□□□ 1.7
RAB40C-201ENST00000248139 TBX4P57082 545 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 HERC3Q15034 1050 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 PIP4K2CQ8TBX8 421 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 NMD3Q96D46 503 aaKnown RBP25.65■■□□□ 1.7
RAB40C-201ENST00000248139 SUSD3Q96L08 255 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 BTBD9Q96Q07 612 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 ARHGAP39Q9C0H5 1083 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 TRAF6Q9Y4K3 522 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 PTPRDP23468 1912 aa25.65■■□□□ 1.7
RAB40C-201ENST00000248139 PRSS51A0A1B0GVH4 220 aa25.64■■□□□ 1.7
RAB40C-201ENST00000248139 ACVRL1P37023 503 aa25.64■■□□□ 1.7
RAB40C-201ENST00000248139 RENBPP51606 427 aa25.64■■□□□ 1.7
RAB40C-201ENST00000248139 GALNT3Q14435 633 aa25.64■■□□□ 1.7
RAB40C-201ENST00000248139 UBXN10Q96LJ8 280 aa25.64■■□□□ 1.7
RAB40C-201ENST00000248139 PRKD2Q9BZL6 878 aa25.64■■□□□ 1.7
RAB40C-201ENST00000248139 VPS28Q9UK41 221 aa25.64■■□□□ 1.7
RAB40C-201ENST00000248139 S1PR4O95977 384 aa25.64■■□□□ 1.69
RAB40C-201ENST00000248139 KLC3Q6P597 504 aa25.64■■□□□ 1.69
RAB40C-201ENST00000248139 ISCA2Q86U28 154 aa25.64■■□□□ 1.69
RAB40C-201ENST00000248139 SERPINB11Q96P15 392 aa25.64■■□□□ 1.69
RAB40C-201ENST00000248139 DSEQ9UL01 958 aa25.64■■□□□ 1.69
RAB40C-201ENST00000248139 TBC1D30Q9Y2I9 924 aa25.64■■□□□ 1.69
RAB40C-201ENST00000248139 FNDC1Q4ZHG4 1894 aaPredicted RBP25.64■■□□□ 1.69
RAB40C-201ENST00000248139 SLC22A2O15244 555 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 ZNF623O75123 536 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 SPATA31D3P0C874 917 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 LRP8Q14114 963 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 C17orf99Q6UX52 265 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 SPATA31D4Q6ZUB0 917 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 SCML4Q8N228 414 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 LRTOMTQ8WZ04 291 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 LPGAT1Q92604 370 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 NOD1Q9Y239 953 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 TRIM38O00635 465 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 MUSKO15146 869 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 POLD2P49005 469 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 YBX1P67809 324 aaKnown RBP25.63■■□□□ 1.69
RAB40C-201ENST00000248139 SEMA3AQ14563 771 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 MAPRE1Q15691 268 aaKnown RBP25.63■■□□□ 1.69
RAB40C-201ENST00000248139 FBXL22Q6P050 247 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 OR13C4Q8NGS5 318 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 DNAJC1Q96KC8 554 aaKnown RBP25.63■■□□□ 1.69
RAB40C-201ENST00000248139 NSUN5Q96P11 429 aaKnown RBP25.63■■□□□ 1.69
RAB40C-201ENST00000248139 SMIM14Q96QK8 99 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 KCNA7Q96RP8 456 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 TRIM8Q9BZR9 551 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 MEAF6Q9HAF1 191 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 SCN10AQ9Y5Y9 1956 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 MYO16Q9Y6X6 1858 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 ANKRD12Q6UB98 2062 aa25.63■■□□□ 1.69
RAB40C-201ENST00000248139 ASGR1P07306 291 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 ADSLP30566 484 aaPredicted RBP25.62■■□□□ 1.69
RAB40C-201ENST00000248139 ZNF157P51786 506 aaPredicted RBP25.62■■□□□ 1.69
RAB40C-201ENST00000248139 CLCN5P51795 746 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 FOXA1P55317 472 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 ZNF549Q6P9A3 640 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 CHSY3Q70JA7 882 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 AMIGO2Q86SJ2 522 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 TICAM1Q8IUC6 712 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 TMEM102Q8N9M5 508 aaPredicted RBP25.62■■□□□ 1.69
RAB40C-201ENST00000248139 SH3GL3Q99963 347 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 RGS18Q9NS28 235 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 LZTS1Q9Y250 596 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 SLC27A5Q9Y2P5 690 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 OR1G1P47890 313 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 MYBPC1Q00872 1141 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 KIAA0408Q6ZU52 694 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 ZNF683Q8IZ20 524 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 TRIM62Q9BVG3 475 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 ZYG11BQ9C0D3 744 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 ARNT2Q9HBZ2 717 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 ATP13A1Q9HD20 1204 aa25.62■■□□□ 1.69
RAB40C-201ENST00000248139 KPNA2P52292 529 aaKnown RBP25.61■■□□□ 1.69
RAB40C-201ENST00000248139 ZFP1Q6P2D0 407 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 CCDC117Q8IWD4 279 aaPredicted RBP25.61■■□□□ 1.69
RAB40C-201ENST00000248139 CFAP52Q8N1V2 620 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 MARVELD2Q8N4S9 558 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 SLC39A13Q96H72 371 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 PRPF18Q99633 342 aaKnown RBP25.61■■□□□ 1.69
RAB40C-201ENST00000248139 SEMA3CQ99985 751 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 LDB2O43679 373 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 ALDOCP09972 364 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms