RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TLDC1Q6P9B6 456 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 ALKAL1Q6UXT8 129 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 TIFABQ6ZNK6 161 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 LIMS2Q7Z4I7 341 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 CLNKQ7Z7G1 428 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 ACOT1Q86TX2 421 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 CAND1Q86VP6 1230 aaKnown RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 KIF2BQ8N4N8 673 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 C12orf29Q8N999 325 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 KYQ8NBH2 561 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 GSDMBQ8TAX9 411 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 FOXRED1Q96CU9 486 aaPredicted RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 SLC7A6OSQ96CW6 309 aaPredicted RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 SERAC1Q96JX3 654 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 SIGLEC10Q96LC7 697 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF560Q96MR9 790 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 C7orf26Q96N11 449 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 MYCBPQ99417 103 aaPredicted RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 EBNA1BP2Q99848 306 aaKnown RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 MRPL45Q9BRJ2 306 aaKnown RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 EIF2B3Q9NR50 452 aaKnown RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 GEMIN8Q9NWZ8 242 aaKnown RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 GDAP2Q9NXN4 497 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 SLC17A7Q9P2U7 560 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 ZFP69BQ9UJL9 534 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 C15orf41Q9Y2V0 281 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 SNX9Q9Y5X1 595 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 IRAK3Q9Y616 596 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 GOLGB1Q14789 3259 aaKnown RBP8.02□□□□□ -1.12
CXCR4-201ENST00000241393 SMIM35A0A1B0GVV1 85 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 SLC15A5A6NIM6 579 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 FAM159BA6NKW6 160 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 COPEO14579 308 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CSDE1O75534 798 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 LMNAP02545 664 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 APRTP07741 180 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF286BP0CG31 522 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ENPP1P22413 925 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 HOXA11P31270 313 aaPredicted RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ELF1P32519 619 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 RGS7P49802 495 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ARFIP2P53365 341 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 SLC8A3P57103 927 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 E2F5Q15329 346 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 XKR4Q5GH76 650 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 EFHC1Q5JVL4 640 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 C9orf57Q5W0N0 161 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ATG16L1Q676U5 607 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 STEAP4Q687X5 459 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF449Q6P9G9 518 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 DLK2Q6UY11 383 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 FAM26EQ8N5C1 309 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ACMSDQ8TDX5 336 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 FUBP3Q96I24 572 aaKnown RBP eCLIP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 RSRC1Q96IZ7 334 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 SLC38A3Q99624 504 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 FERMT1Q9BQL6 677 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 NAT9Q9BTE0 207 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 TRIM8Q9BZR9 551 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 IQCGQ9H095 443 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 OR10A5Q9H207 317 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ABHD16BQ9H3Z7 469 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 POFUT1Q9H488 388 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 STK38LQ9Y2H1 464 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 PLLPQ9Y342 182 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 HEY1Q9Y5J3 304 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 NRCAMQ92823 1304 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 MBLAC1A4D2B0 266 aaPredicted RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 A8MXQ7 604 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 TRIM49D1C9J1S8 452 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 RFXAPO00287 272 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 PIRO00625 290 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 BIRC5O15392 142 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CCDC22O60826 627 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 GPR32O75388 356 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 GRAP2O75791 330 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 HAUS5O94927 633 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ANP32DO95626 131 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 SNAI1O95863 264 aaPredicted RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 DLDP09622 509 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 DARSP14868 501 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 KCNE1P15382 129 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CRHR1P34998 444 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CA9Q16790 459 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 SOWAHAQ2M3V2 549 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 RAB6CQ53S08 254 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 TAF1BQ53T94 588 aaPredicted RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CMPK2Q5EBM0 449 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 FBXO47Q5MNV8 452 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 GJC2Q5T442 439 aaPredicted RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 LIPIQ6XZB0 460 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 MOB2Q70IA6 237 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CATSPER4Q7RTX7 472 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 PROSER1Q86XN7 944 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 CTAGE3PQ8IX95 158 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 PPM1NQ8N819 430 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 ENDOVQ8N8Q3 282 aaKnown RBP8.02□□□□□ -1.13
CXCR4-201ENST00000241393 OR6B3Q8NGW1 331 aa8.02□□□□□ -1.13
CXCR4-201ENST00000241393 TTC17Q96AE7 1141 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms