RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PSMD5Q16401 504 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 ZC3H12BQ5HYM0 836 aaKnown RBP13.8□□□□□ -0.2
NFKB1-201ENST00000226574 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 NCBP2-AS2Q69YL0 99 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 GALNT5Q7Z7M9 940 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 CIR1Q86X95 450 aaPredicted RBP13.8□□□□□ -0.2
NFKB1-201ENST00000226574 OR9Q1Q8NGQ5 310 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 FZD8Q9H461 694 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 SLC2A6Q9UGQ3 507 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 POLG2Q9UHN1 485 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 TOPAZ1Q8N9V7 1692 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 GNG14A0A1W2PPG7 69 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 FAM159BA6NKW6 160 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 OAS1P00973 400 aaKnown RBP13.8□□□□□ -0.2
NFKB1-201ENST00000226574 DSC2Q02487 901 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 PCLAFQ15004 111 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 FAM171A1Q5VUB5 890 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 OGFOD2Q6N063 350 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 EFL1Q7Z2Z2 1120 aaKnown RBP13.8□□□□□ -0.2
NFKB1-201ENST00000226574 SCAMP5Q8TAC9 235 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 XYLT2Q9H1B5 865 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 TMEM247A6NEH6 219 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 SMIM10L2AP0DMW4 78 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 SMIM10L2BP0DMW5 78 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 GNAZP19086 355 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 PBLDP30039 288 aaPredicted RBP13.8□□□□□ -0.2
NFKB1-201ENST00000226574 CPT1AP50416 773 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 LILRA4P59901 499 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 SLC10A2Q12908 348 aaPredicted RBP13.8□□□□□ -0.2
NFKB1-201ENST00000226574 KLHDC10Q6PID8 442 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 XKR5Q6UX68 686 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 SFRP1Q8N474 314 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 OR56A4Q8NGH8 313 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 SIRPGQ9P1W8 387 aa13.8□□□□□ -0.2
NFKB1-201ENST00000226574 TREHO43280 583 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 FAM20BO75063 409 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 DNAJB2P25686 324 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 SLC11A2P49281 568 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 ZNF157P51786 506 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 HSPA14Q0VDF9 509 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 VEPH1Q14D04 833 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 HECTD2Q5U5R9 776 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 ZNF410Q86VK4 478 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 C8orf59Q8N0T1 100 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 PSMA8Q8TAA3 256 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 RASSF1Q9NS23 344 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 MYH1P12882 1939 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 TAF1P21675 1872 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 SCN11AQ9UI33 1791 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 A0A087X1B8 175 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 J3QRK9 145 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 UBXN8O00124 270 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 GPR182O15218 404 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 ATP6V1G1O75348 118 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 AHSGP02765 367 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 PRKCGP05129 697 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 NOVP48745 357 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 RAP1GDS1P52306 607 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 IL2P60568 153 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 RUNX1T1Q06455 604 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 PRKG2Q13237 762 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 MBLAC2Q68D91 279 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 EID3Q8N140 333 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 FBXL8Q96CD0 374 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 C19orf60Q96EN9 201 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 SOX17Q9H6I2 414 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 COPG1Q9Y678 874 aaKnown RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 TRAFD1O14545 582 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 DLX3O60479 287 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 CST1P01037 141 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 DBTP11182 482 aaKnown RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 FGF3P11487 239 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 AQP1P29972 269 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 HK2P52789 917 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 MAPKAPK3Q16644 382 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 SPDYE7PQ495Y7 208 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 LRRC52Q8N7C0 313 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 GANCQ8TET4 914 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 PCED1BQ96HM7 432 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 MAML3Q96JK9 1138 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 PPP1R2P1Q96PQ5 205 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
NFKB1-201ENST00000226574 PLGRKTQ9HBL7 147 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 FETUBQ9UGM5 382 aa13.79□□□□□ -0.2
NFKB1-201ENST00000226574 MYO5AQ9Y4I1 1855 aaKnown RBP13.78□□□□□ -0.2
NFKB1-201ENST00000226574 A0A088AWK7 358 aa13.78□□□□□ -0.2
NFKB1-201ENST00000226574 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
NFKB1-201ENST00000226574 DPYSL2Q16555 572 aa13.78□□□□□ -0.2
NFKB1-201ENST00000226574 TJAP1Q5JTD0 557 aa13.78□□□□□ -0.2
NFKB1-201ENST00000226574 LZTR1Q8N653 840 aa13.78□□□□□ -0.2
NFKB1-201ENST00000226574 TRNAU1APQ9NX07 287 aaKnown RBP13.78□□□□□ -0.2
NFKB1-201ENST00000226574 IPPQ9Y573 584 aa13.78□□□□□ -0.2
NFKB1-201ENST00000226574 CELF2O95319 508 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms