RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ADRA1DP25100 572 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 ARHGDIBP52566 201 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 UGT2B15P54855 530 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 RPL38P63173 70 aaKnown RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 OC90Q02509 493 aaPredicted RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 RBBP4Q09028 425 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 MAPKAPK3Q16644 382 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 TXNDC11Q6PKC3 985 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 CFAP52Q8N1V2 620 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 MSL3Q8N5Y2 521 aaKnown RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 ATAD1Q8NBU5 361 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 ZNF483Q8TF39 744 aaPredicted RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 DUSP16Q9BY84 665 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 SLC35C2Q9NQQ7 365 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 ZDHHC9Q9Y397 364 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 CLTCL1P53675 1640 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 PIGNO95427 931 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 LDOC1O95751 146 aaPredicted RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 KCNA5P22460 613 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 CTSOP43234 321 aaPredicted RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 DGKGP49619 791 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 CYP4F2P78329 520 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 CPSF6Q16630 551 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 TMEM119Q4V9L6 283 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 FUT10Q6P4F1 479 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 TNS4Q8IZW8 715 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 NOA1Q8NC60 698 aaKnown RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 ZNF398Q8TD17 642 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 PHF10Q8WUB8 498 aaKnown RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 Q96MT0 163 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 GAL3ST4Q96RP7 486 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 GPR20Q99678 358 aa10.59□□□□□ -0.71
TRPS1-201ENST00000220888 C6orf62Q9GZU0 229 aaPredicted RBP10.59□□□□□ -0.71
TRPS1-201ENST00000220888 IQCMA0A1B0GVH7 501 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 A0A1W2PQH9 124 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 FCHO1O14526 889 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 DCLK1O15075 740 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 CLOCKO15516 846 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 GJB6O95452 261 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 SSTR1P30872 391 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 CBX5P45973 191 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 OMPP47874 163 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 AVPR1BP47901 424 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 ATP6V0D1P61421 351 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 ZNF549Q6P9A3 640 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 GPRIN3Q6ZVF9 776 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 OFCC1Q8IZS5 231 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 KREMEN2Q8NCW0 462 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 OR4L1Q8NH43 312 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 FBXO30Q8TB52 745 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 GPER1Q99527 375 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 SNRNP25Q9BV90 132 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 KLHL4Q9C0H6 718 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 GPR88Q9GZN0 384 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 NXF3Q9H4D5 531 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 MFHAS1Q9Y4C4 1052 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 PEX11AO75192 247 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 FKBP6O75344 327 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 RARAP10276 462 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 TFEBP19484 476 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 AGXTP21549 392 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 CCR3P51677 355 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 AMZ1Q400G9 498 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 SLC30A9Q6PML9 568 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 P4HA3Q7Z4N8 544 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 OAFQ86UD1 273 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 GPR180Q86V85 440 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 ZNF276Q8N554 614 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 ENKURQ8TC29 256 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 AARSD1Q9BTE6 412 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 PTGFRNQ9P2B2 879 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 NAALADL1Q9UQQ1 740 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 DERAQ9Y315 318 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 GMFGO60234 142 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 TMCC2O75069 709 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 ME2P23368 584 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 MAT2AP31153 395 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 KCNJ5P48544 419 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 RPL14P50914 215 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 TIMM50Q3ZCQ8 353 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 KLHL12Q53G59 568 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 RASSF6Q6ZTQ3 369 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 PRSS58Q8IYP2 241 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 UNC5BQ8IZJ1 945 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 FAM81AQ8TBF8 368 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 TEX47Q8TBZ9 253 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 SETD7Q8WTS6 366 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 SLC22A17Q8WUG5 538 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 MKL1Q969V6 931 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 PMEPA1Q969W9 287 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 DDX18Q9NVP1 670 aaKnown RBP10.58□□□□□ -0.72
TRPS1-201ENST00000220888 KCTD5Q9NXV2 234 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 COPG2Q9UBF2 871 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 CEMIPQ8WUJ3 1361 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 GLYATL1P3A0A0U1RQE8 302 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 STX16-NPEPL1H3BU86 382 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 STX16O14662 325 aa10.58□□□□□ -0.72
TRPS1-201ENST00000220888 SLC35G6P0C7Q6 338 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms