RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ARNT2Q9HBZ2 717 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 CASS4Q9NQ75 786 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 B4GALT6Q9UBX8 382 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 FZD4Q9ULV1 537 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 A0A0U1RQS6 177 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 CAPN8A6NHC0 703 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 NPIPB15A6NHN6 443 aaPredicted RBP27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 PRR33A8MZF0 331 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 NEMP1O14524 444 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 MCUQ8NE86 351 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 BLOC1S5Q8TDH9 187 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 RAB7BQ96AH8 199 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 SCRN2Q96FV2 425 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 MCCC1Q96RQ3 725 aaPredicted RBP27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 SPO11Q9Y5K1 396 aa27.36■■□□□ 1.97
CHMP4B-201ENST00000217402 CACNA1IQ9P0X4 2223 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 BHMG1C9JSJ3 638 aaPredicted RBP27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 NDC80O14777 642 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 GPR37L1O60883 481 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 AVILO75366 819 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 SLC4A1P02730 911 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 ADPRHP54922 357 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 DRG2P55039 364 aaKnown RBP27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 PLTPP55058 493 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 SESN2P58004 480 aaPredicted RBP27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 TAS2R38P59533 333 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 DENND2CQ68D51 928 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 IFT81Q8WYA0 676 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 FAM131CQ96AQ9 280 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 PWWP2AQ96N64 755 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 SERPINB12Q96P63 405 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 INVSQ9Y283 1065 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 PPIL1Q9Y3C6 166 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 FADS3Q9Y5Q0 445 aa27.35■■□□□ 1.97
CHMP4B-201ENST00000217402 PRR23AA6NEV1 266 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 FAM47DPA6NHR8 397 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 AREL1O15033 823 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 ZNF217O75362 1048 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 TDGF1P13385 188 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 NFKBIAP25963 317 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 MMP12P39900 470 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 FNTBP49356 437 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 LRRC8BQ6P9F7 803 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 TSPAN33Q86UF1 283 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 CAND1Q86VP6 1230 aaKnown RBP27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 FAM160A2Q8N612 972 aaPredicted RBP27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 FRMD1Q8N878 549 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 WRAP53Q9BUR4 548 aaKnown RBP27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 FAM114A2Q9NRY5 505 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 SLC7A4O43246 635 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 PLRG1O43660 514 aaKnown RBP27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 CYP2A6P11509 494 aaPredicted RBP27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 ACSL1P33121 698 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 SUOXP51687 545 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 ELP6Q0PNE2 266 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 POU6F1Q14863 301 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 CERCAMQ5T4B2 595 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 ZDHHC24Q6UX98 284 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 DPPA4Q7L190 304 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 UBXN4Q92575 508 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 ART4Q93070 314 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 BTBD1Q9H0C5 482 aa27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 XAB2Q9HCS7 855 aaKnown RBP27.34■■□□□ 1.97
CHMP4B-201ENST00000217402 SMAPO00193 183 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 IGLV3-19P01714 112 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 LHCGRP22888 699 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 HOXA6P31267 233 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 VIPR1P32241 457 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 TUBB4BP68371 445 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 IFT20Q8IY31 132 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 FBXO25Q8TCJ0 367 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 GDF3Q9NR23 364 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 ZNF711Q9Y462 761 aa27.33■■□□□ 1.97
CHMP4B-201ENST00000217402 KMT2EQ8IZD2 1858 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 C1orf232A0A0U1RR37 186 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 PCDH8O95206 1070 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 CRADDP78560 199 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 RALGDSQ12967 914 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 SEPT6Q14141 434 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 HLTFQ14527 1009 aaKnown RBP eCLIP27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 MAP7D1Q3KQU3 841 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 CRTC1Q6UUV9 634 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 LYSMD3Q7Z3D4 306 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 TOE1Q96GM8 510 aaKnown RBP27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 ANKZF1Q9H8Y5 726 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 MAGEE1Q9HCI5 957 aa27.32■■□□□ 1.96
CHMP4B-201ENST00000217402 IGHV1OR15-9A0A0B4J2B8 117 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 AURKAO14965 403 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 AP1G1O43747 822 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 MGAT1P26572 445 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 CD6P30203 668 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 CARSP49589 748 aaKnown RBP27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 ERCC6LQ2NKX8 1250 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 FNBP1LQ5T0N5 605 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 LRRC66Q68CR7 880 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 GLT6D1Q7Z4J2 308 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 LYSMD1Q96S90 227 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 C1QTNF1Q9BXJ1 281 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 SGK2Q9HBY8 427 aa27.31■■□□□ 1.96
CHMP4B-201ENST00000217402 FBXO4Q9UKT5 387 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms