RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 ZNF232Q9UNY5 417 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 SLC8A2Q9UPR5 921 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 XYLBO75191 536 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 FUCA1P04066 466 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 BMXP51813 675 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 YWHAHQ04917 246 aaPredicted RBP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 SAMD4BQ5PRF9 694 aaKnown RBP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 CMTR2Q8IYT2 770 aaKnown RBP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 AFAP1L2Q8N4X5 818 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 SLC15A4Q8N697 577 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 CNTD1Q8N815 330 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 STYXQ8WUJ0 223 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 ANKRD49Q8WVL7 239 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 B3GALT6Q96L58 329 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 KLHL5Q96PQ7 755 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 DAPK2Q9UIK4 370 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 GJD2Q9UKL4 321 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 SH3PXD2BA1X283 911 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 TMEM247A6NEH6 219 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 CPB1P15086 417 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 NFKBIAP25963 317 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 DIO3P55073 304 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 FOXA1P55317 472 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 LAPTM5Q13571 262 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 NFYCQ13952 458 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 DGCR6Q14129 220 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 PGS1Q32NB8 556 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 STXBP5Q5T5C0 1151 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 NANOGP8Q6NSW7 305 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 CCDC81Q6ZN84 652 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 BTLAQ7Z6A9 289 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 OR2T34Q8NGX1 318 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 OR2T3Q8NH03 318 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 ELMO1Q92556 727 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 ABHD8Q96I13 439 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 SARS2Q9NP81 518 aaKnown RBP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 RBM22Q9NW64 420 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 KCTD3Q9Y597 815 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 RAD54BQ9Y620 910 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 H3BMQ9 156 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 NME4O00746 187 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 RSL1D1O76021 490 aaKnown RBP16.81■□□□□ 0.28
CTDP1-201ENST00000075430 LRIG2O94898 1065 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 SLC7A1P30825 629 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 PTPN9P43378 593 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 CD151P48509 253 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 KCNC1P48547 511 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 MCCD1P59942 119 aaPredicted RBP16.81■□□□□ 0.28
CTDP1-201ENST00000075430 C6orf183Q5T699 404 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 NEPROQ6NW34 567 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 GPR180Q86V85 440 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 CARM1Q86X55 608 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 WNT8BQ93098 351 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 ITCHQ96J02 903 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 ZNF597Q96LX8 424 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 COG8Q96MW5 612 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 OLFM1Q99784 485 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 VTI1BQ9UEU0 232 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 SLC27A5Q9Y2P5 690 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 IGKV6D-21A0A0A0MT36 114 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 A8MT66 165 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 MSI1O43347 362 aaKnown RBP16.81■□□□□ 0.28
CTDP1-201ENST00000075430 TSPAN1O60635 241 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 SLC25A27O95847 323 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 HGFP14210 728 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 GRM5P41594 1212 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 DNASE1L3Q13609 305 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 GPC2Q8N158 579 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 OR6J1Q8NGC5 347 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 INIPQ9NRY2 104 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 FAM50BQ9Y247 325 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 TTC3P53804 2025 aa16.81■□□□□ 0.28
CTDP1-201ENST00000075430 HACD1B0YJ81 288 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 NOBOXO60393 691 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 BCL10O95999 233 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 GSSP48637 474 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 RAD23AP54725 363 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 NRG1Q02297 640 aaPredicted RBP16.8■□□□□ 0.28
CTDP1-201ENST00000075430 INCA1Q0VD86 236 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 ADRM1Q16186 407 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 ANKRD34AQ69YU3 496 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 NAPEPLDQ6IQ20 393 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 GPRIN1Q7Z2K8 1008 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 HS3ST5Q8IZT8 346 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 MIER2Q8N344 545 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 BBS5Q8N3I7 341 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 SMG8Q8ND04 991 aaKnown RBP16.8■□□□□ 0.28
CTDP1-201ENST00000075430 COX4I2Q96KJ9 171 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 RANBP9Q96S59 729 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 GPR22Q99680 433 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 IL22Q9GZX6 179 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 MIR1-1HGQ9H1L0 117 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 VPS51Q9UID3 782 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 DPYSL4O14531 572 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 KDM1AO60341 852 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 CYP2B6P20813 491 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 TGFBIQ15582 683 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 TIGD2Q4W5G0 525 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 CAMK1DQ8IU85 385 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms