RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Kpnb1P70168 876 aaKnown RBP13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Mpp1P70290 466 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ccdc138Q0VF22 680 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Nat9Q3UG98 241 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm853Q3UNZ2 425 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Scn2bQ56A07 215 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Arhgap26Q6ZQ82 814 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ubr7Q8BU04 425 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ipo13Q8K0C1 963 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Serpinb10Q8K1K6 397 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Pitrm1Q8K411 1036 aaKnown RBP13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 FtcdQ91XD4 541 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 B3galt6Q91Z92 325 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Adam33Q923W9 797 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Actr3Q99JY9 418 aaKnown RBP13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ptdss1Q99LH2 473 aaKnown RBP13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Lgals2Q9CQW5 130 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 XpotQ9CRT8 963 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Tmem114Q9D563 222 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Nsmce1Q9D720 266 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Dpysl5Q9EQF6 564 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Slc29a1Q9JIM1 460 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Tcp11x2A2AEI7 503 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm7073E9QAS1 335 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Per3O70361 1113 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 PolP11369 1281 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 StradaQ3UUJ4 431 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Pcnx4Q3UVY5 1174 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Olfr667Q7TRP4 326 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Hmgxb4Q80Y32 594 aaKnown RBP13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Noc4lQ8BHY2 516 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rcn2Q8BP92 320 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Naa25Q8BWZ3 972 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Anapc2Q8BZQ7 837 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Galnt5Q8C102 930 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Q8C4P0 716 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 FgbQ8K0E8 481 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Tgif2lx2Q8K5B9 231 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Vps11Q91W86 941 aaKnown RBP13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Psmd8Q9CX56 353 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ccdc130Q9D516 385 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rnft1Q9DCN7 395 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Nt5cQ9JM14 200 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Itgb1bp2Q9R000 350 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 B9d1Q9R1S0 204 aa13.4□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm6370A0A0G2JGX9 315 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ccdc194A0A140LIT1 234 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Mroh7A2AVR2 1279 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gm6309L7N481 315 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Smpdl3bP58242 456 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 ThraP63058 492 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 PrkcgP63318 697 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Wbp2P97765 261 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 SobpQ0P5V2 864 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gspt2Q149F3 632 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Dnajb14Q149L6 379 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ccdc127Q3TC33 260 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 B020004J07RikQ3UTC0 476 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Spata48Q5NC83 441 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 9930111J21Rik1Q5SVP0 844 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Adora2aQ60613 410 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 GpamQ61586 827 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 RgnQ64374 299 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Tigd3Q7TM95 470 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Alkbh8Q80Y20 664 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 B3gnt5Q8BGY6 376 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Neu4Q8BZL1 478 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 4932414N04RikQ8CEQ9 752 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Spp2Q8K1I3 203 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Sgpl1Q8R0X7 568 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Tmem30aQ8VEK0 364 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 AmotQ8VHG2 1126 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cdc26Q99JP4 85 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ssxb1Q9CPU1 170 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Psmd9Q9CR00 222 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Snrnp48Q9D361 337 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 MajinQ9D992 256 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 CdylQ9WTK2 593 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Il18rapQ9Z2B1 614 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Tex13c2A0A0G2JGA3 530 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ralgps1A2AR50 585 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 4931406B18RikA2RSL7 367 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 NuggcD3YWJ0 796 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 PtproE9Q612 1226 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Nsmce4aG3XA30 381 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Vmn2r46L7N282 809 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 IkbkgO88522 412 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Itm2bO89051 266 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 P01810 119 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Itgb1P09055 798 aaKnown RBP13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Man1a1P45700 655 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ppp3ccP48455 513 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Matn1P51942 500 aaKnown RBP13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Lrrn4P59383 733 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Klrb1Q0ZUP1 214 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cdkl4Q3TZA2 342 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Rsrp1Q3UC65 298 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Luc7l3Q5SUF2 432 aaKnown RBP13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Crhr2Q60748 411 aa13.39□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 MelkQ61846 643 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms