RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 AGAP3Q96P47 875 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 XPO6Q96QU8 1125 aaKnown RBP17.39■□□□□ 0.37
PHGDH-234ENST00000642041 ATXN3LQ9H3M9 355 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 ARNT2Q9HBZ2 717 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 TRPC7Q9HCX4 862 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 DNAJC17Q9NVM6 304 aaKnown RBP17.39■□□□□ 0.37
PHGDH-234ENST00000642041 POLR3BQ9NW08 1133 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-234ENST00000642041 OBP2AQ9NY56 170 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 EURLQ9NYK6 297 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 CHMP2BQ9UQN3 213 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 TBC1D30Q9Y2I9 924 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 THADAQ6YHU6 1953 aa17.39■□□□□ 0.37
PHGDH-234ENST00000642041 KIF26AQ9ULI4 1882 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 TCRBV9S1A1TA0A576 114 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 UPK3BL1B0FP48 263 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 UPK3BL2E5RIL1 263 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 POC1B-GALNT4F8VUJ3 575 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 PRPF4O43172 522 aaKnown RBP eCLIP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 CYBBP04839 570 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 CA4P22748 312 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 CORO1AP31146 461 aaKnown RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 HPDP32754 393 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 POLD2P49005 469 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 C19orf57Q0VDD7 668 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 LMAN2Q12907 356 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 ITPRIPL2Q3MIP1 535 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 CASC4Q6P4E1 433 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 CYP2U1Q7Z449 544 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 C14orf80Q86SX3 495 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 ANKMY2Q8IV38 441 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 LMNTD2Q8IXW0 634 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 SLC44A1Q8WWI5 657 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 CELF6Q96J87 481 aaKnown RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 POLR1EQ9GZS1 481 aaKnown RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 INTS9Q9NV88 658 aaKnown RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 MOCS1Q9NZB8 636 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 MPP6Q9NZW5 540 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 TXNDC16Q9P2K2 825 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 SEPT3Q9UH03 358 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 EVLQ9UI08 416 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 SH3BP1Q9Y3L3 701 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 MFHAS1Q9Y4C4 1052 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 FAM169AQ9Y6X4 670 aa17.38■□□□□ 0.37
PHGDH-234ENST00000642041 URB1O60287 2271 aaKnown RBP17.38■□□□□ 0.37
PHGDH-234ENST00000642041 GON4LQ3T8J9 2241 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 A0A1W2PRU2 124 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 E2F8A0AVK6 867 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 KDELR3O43731 214 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 PRAMEF11O60813 436 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 APBB3O95704 486 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 HMBSP08397 361 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 SNRPAP09012 282 aaKnown RBP17.37■□□□□ 0.37
PHGDH-234ENST00000642041 TCF3P15923 654 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 NFKB1P19838 968 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 SSTR1P30872 391 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 CYP4F8P98187 520 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 GNA12Q03113 381 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 SLC20A2Q08357 652 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 SEPT7Q16181 437 aaKnown RBP17.37■□□□□ 0.37
PHGDH-234ENST00000642041 UGP2Q16851 508 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 MSS51Q4VC12 460 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 MPPE1Q53F39 396 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 INO80DQ53TQ3 878 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-234ENST00000642041 PCID2Q5JVF3 399 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 GAREM2Q75VX8 874 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 RAB44Q7Z6P3 723 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-234ENST00000642041 TMEM150AQ86TG1 271 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 EXOC3L1Q86VI1 746 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 ZNF354CQ86Y25 554 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 DENND1CQ8IV53 801 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 FAM217AQ8IXS0 508 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 ACMSDQ8TDX5 336 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 SCG3Q8WXD2 468 aaKnown RBP17.37■□□□□ 0.37
PHGDH-234ENST00000642041 OTUB2Q96DC9 234 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 TMA16Q96EY4 203 aaKnown RBP17.37■□□□□ 0.37
PHGDH-234ENST00000642041 PWWP2AQ96N64 755 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 SRPK1Q96SB4 655 aaKnown RBP17.37■□□□□ 0.37
PHGDH-234ENST00000642041 PAFAH2Q99487 392 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 FSD1LQ9BXM9 530 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 CCDC134Q9H6E4 229 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 SCUBE2Q9NQ36 999 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 TBC1D14Q9P2M4 693 aa17.37■□□□□ 0.37
PHGDH-234ENST00000642041 PI4KAP42356 2102 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 FAM159BA6NKW6 160 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 CYSRT1A8MQ03 144 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 TM9SF1O15321 606 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 ZWINTO95229 277 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 RHOCP08134 193 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 BRAFP15056 766 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 WEE1P30291 646 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 SLCO1A2P46721 670 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 IRAK1P51617 712 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 GNGT1P63211 74 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 ZNF423Q2M1K9 1284 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 TMEM135Q86UB9 458 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 TRABD2AQ86V40 505 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 UHMK1Q8TAS1 419 aaKnown RBP17.36■□□□□ 0.37
PHGDH-234ENST00000642041 IGSF8Q969P0 613 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 ACDQ96AP0 544 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 LRIG1Q96JA1 1093 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms