RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CILP2Q8IUL8 1156 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 TCEAL4Q96EI5 215 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 TBATAQ96M53 351 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 NSMCE3Q96MG7 304 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 HTATIP2Q9BUP3 242 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 NMRAL1Q9HBL8 299 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 ABCF3Q9NUQ8 709 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 ZNF358Q9NW07 568 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 ACOT9Q9Y305 439 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 KCTD3Q9Y597 815 aa17.38■□□□□ 0.37
PHGDH-208ENST00000641023 MTCL1Q9Y4B5 1905 aaKnown RBP17.37■□□□□ 0.37
PHGDH-208ENST00000641023 CCDC195A0A1B0GUA6 201 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 GLP2RO95838 553 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 PRLP01236 227 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 PRKCGP05129 697 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 EPCAMP16422 314 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 ARSDP51689 593 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 IRF9Q00978 393 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 POU4F1Q01851 419 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 STX3Q13277 289 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 SETDB1Q15047 1291 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 NCEH1Q6PIU2 408 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 APCDD1Q8J025 514 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 GPATCH11Q8N954 259 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 ELMO2Q96JJ3 720 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 RMDN2Q96LZ7 410 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 FBXO6Q9NRD1 293 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-208ENST00000641023 TDP1Q9NUW8 608 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 THAP1Q9NVV9 213 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 LHX3Q9UBR4 397 aa17.37■□□□□ 0.37
PHGDH-208ENST00000641023 FCF1Q9Y324 198 aaKnown RBP17.37■□□□□ 0.37
PHGDH-208ENST00000641023 C2orf81A6NN90 581 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 ANKRD66B4E2M5 251 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 PHGDHO43175 533 aaKnown RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CLASP2O75122 1294 aaKnown RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 RPP40O75818 363 aaKnown RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 DCTN3O75935 186 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 APOA4P06727 396 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 PIRTP0C851 137 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CPA3P15088 417 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 MYOGP15173 224 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 KCNA4P22459 653 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 PCLAFQ15004 111 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 PDE12Q6L8Q7 609 aaKnown RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 MRNIPQ6NTE8 343 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 GLT6D1Q7Z4J2 308 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 SPRED2Q7Z698 418 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CCDC91Q7Z6B0 441 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 SLC41A1Q8IVJ1 513 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 LPCAT1Q8NF37 534 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 PDCD6IPQ8WUM4 868 aaKnown RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 C10orf82Q8WW14 230 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 SREK1Q8WXA9 508 aaKnown RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 USP13Q92995 863 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 DNAJC1Q96KC8 554 aaKnown RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 ZMYM5Q9UJ78 669 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 MID2Q9UJV3 735 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CCL26Q9Y258 94 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 SNNO75324 88 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 MOSPD3O75425 235 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 MT-CO1P00395 513 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 PDHA1P08559 390 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 SLC35E2BP0CK96 405 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 GRK2P25098 689 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CLCN5P51795 746 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 OCRLQ01968 901 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 SLC20A2Q08357 652 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CCDC15Q0P6D6 951 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 LMAN2Q12907 356 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 TAF1AQ15573 450 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-208ENST00000641023 MBLAC2Q68D91 279 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CNSTQ6PJW8 725 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CRLF3Q8IUI8 442 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 FITM2Q8N6M3 262 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 OR13C4Q8NGS5 318 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 LRRC37BQ96QE4 947 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 DCTN4Q9UJW0 460 aa17.36■□□□□ 0.37
PHGDH-208ENST00000641023 CCL22O00626 93 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 BUD23O43709 281 aaKnown RBP17.35■□□□□ 0.37
PHGDH-208ENST00000641023 GOT2P00505 430 aaKnown RBP17.35■□□□□ 0.37
PHGDH-208ENST00000641023 GMPRP36959 345 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 AP1S1P61966 158 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 PLEKHG6Q3KR16 790 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 ELMSAN1Q6PJG2 1045 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 C10orf107Q8IVU9 208 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 SAMD11Q96NU1 681 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 OMDQ99983 421 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 ZMYND15Q9H091 742 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 ABCB8Q9NUT2 735 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 NLE1Q9NVX2 485 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-208ENST00000641023 ZDHHC7Q9NXF8 308 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 CLEC4EQ9ULY5 219 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 A0A0G2JND7 137 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 CXorf51AA0A1B0GTR3 108 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 ARHGEF15O94989 841 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 SERPINE1P05121 402 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 CA3P07451 260 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 PLK1P53350 603 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 ZCCHC23Q6ZST2 131 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms