RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 MT-ND1P03886 318 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 KCNC1P48547 511 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 STX1BP61266 288 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 RPS6KA2Q15349 733 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 CIR1Q86X95 450 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-221ENST00000640341 AFAP1L2Q8N4X5 818 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 ADCY4Q8NFM4 1077 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 PRDM16Q9HAZ2 1276 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 PDLIM1O00151 329 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 FBP2O00757 339 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 CES1P23141 567 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 PCSK6P29122 969 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 SCIMPQ6UWF3 145 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 DCBLD1Q8N8Z6 715 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 EZH1Q92800 747 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-221ENST00000640341 KCNA7Q96RP8 456 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 CCDC28BQ9BUN5 200 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 FLRT1Q9NZU1 646 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 RAB26Q9ULW5 256 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 TRAF6Q9Y4K3 522 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 MBLAC1A4D2B0 266 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 HHLA1C9JL84 531 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ITGB1P05556 798 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 HCAR3P49019 387 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ARSDP51689 593 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 AIF1P55008 147 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 SLC10A7Q0GE19 358 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 VPS26BQ4G0F5 336 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ZBTB49Q6ZSB9 765 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 BHLHA9Q7RTU4 235 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 NUP93Q8N1F7 819 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CANT1Q8WVQ1 401 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 B3GALT6Q96L58 329 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 SPAG4Q9NPE6 437 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CDH9Q9ULB4 789 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 MATN3O15232 486 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 DENRO43583 198 aaKnown RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CLIC3O95833 236 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 SNRPB2P08579 225 aaKnown RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 LTA4HP09960 611 aaKnown RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CCNCP24863 283 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 RGS2P41220 211 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 FUT11Q495W5 492 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 HECTD2Q5U5R9 776 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CXCL17Q6UXB2 119 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ZBTB46Q86UZ6 589 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 METTL23Q86XA0 190 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CPSF7Q8N684 471 aaKnown RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CATSPER1Q8NEC5 780 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 HMGCLL1Q8TB92 370 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 C3orf30Q96M34 536 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 FCRL5Q96RD9 977 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ENTPD7Q9NQZ7 604 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 IGSF5Q9NSI5 407 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 MARCH4Q9P2E8 410 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 SRP72O76094 671 aaKnown RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 KPNA2P52292 529 aaKnown RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 SLC5A3P53794 718 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ARPP19P56211 112 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 PFKFB4Q16877 469 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 SMYD5Q6GMV2 418 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 POTEHQ6S545 545 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 OR10T2Q8NGX3 314 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ABTB1Q969K4 478 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 ASB9Q96DX5 294 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 HAPLN3Q96S86 360 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 MCMBPQ9BTE3 642 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CATSPERBQ9H7T0 1116 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 EML4Q9HC35 981 aaKnown RBP14.67□□□□□ -0.06
SCARB2-221ENST00000640341 SLC38A7Q9NVC3 462 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 CROTQ9UKG9 612 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 A0A0G2JMZ2 1700 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 LRRC37A2A6NM11 1700 aa14.67□□□□□ -0.06
SCARB2-221ENST00000640341 PRSS51A0A1B0GVH4 220 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 TBX18O95935 607 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 CDKN2DP55273 166 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 USP46P62068 366 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 ECT2LQ008S8 904 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 PLIN5Q00G26 463 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 INTS6LQ5JSJ4 861 aaKnown RBP14.66□□□□□ -0.06
SCARB2-221ENST00000640341 PM20D1Q6GTS8 502 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 B3GNT6Q6ZMB0 384 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 SPPL2CQ8IUH8 684 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 TSPAN14Q8NG11 270 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 SP110Q9HB58 689 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 MID1IP1Q9NPA3 183 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 RHBDL2Q9NX52 303 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 RNF103-CHMP3A0A140T963 221 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 E9PAM4 449 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 PLOD2O00469 737 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 UBFD1O14562 309 aaKnown RBP14.66□□□□□ -0.06
SCARB2-221ENST00000640341 CRCPO75575 148 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 PYGLP06737 847 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 PRSS56P0CW18 603 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 HAPLN1P10915 354 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-221ENST00000640341 GFAPP14136 432 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 POU4F1Q01851 419 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 GRB14Q14449 540 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 TMEM102Q8N9M5 508 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms