RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ABL2P42684 1182 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 RABGGTBP53611 331 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 ITGADQ13349 1161 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 MAPKAPK3Q16644 382 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 FAM228AQ86W67 206 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 BPIFB6Q8NFQ5 453 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 MTFMTQ96DP5 389 aaKnown RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 KANSL3Q9P2N6 904 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TNPO3Q9Y5L0 923 aaKnown RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 CNOT3O75175 753 aaKnown RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 RTN3O95197 1032 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TOP3BO95985 862 aaKnown RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 SOWAHAQ2M3V2 549 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 DUSP28Q4G0W2 176 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TMEM198Q66K66 360 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 ZNF621Q6ZSS3 439 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 RELL1Q8IUW5 271 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 CNTD1Q8N815 330 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TPD52L3Q96J77 140 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 ADAM7Q9H2U9 754 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 VPS45Q9NRW7 570 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 DMTF1Q9Y222 760 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TPRKBQ9Y3C4 175 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 CD3EAPO15446 510 aaKnown RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 MLYCDO95822 493 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 PBLDP30039 288 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 TAS2R39P59534 338 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 SIX1Q15475 284 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 DDR2Q16832 855 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 GPR158Q5T848 1215 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 HECTD2Q5U5R9 776 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 GPR142Q7Z601 462 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 ZDHHC14Q8IZN3 488 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 PCSK9Q8NBP7 692 aaKnown RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 SETD9Q8NE22 299 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 ACTRT2Q8TDY3 377 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 LRP6O75581 1613 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 SNAP91O60641 907 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 LILRA4P59901 499 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 SLC18A2Q05940 514 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 ELAVL2Q12926 359 aaKnown RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 BRMS1LQ5PSV4 323 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 GPRIN3Q6ZVF9 776 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 RAB42Q8N4Z0 105 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 DQX1Q8TE96 717 aaKnown RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 NAT14Q8WUY8 206 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 EMID1Q96A84 441 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 BTBD9Q96Q07 612 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 ARL15Q9NXU5 204 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 FAM149AA5PLN7 773 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 ADCY6O43306 1168 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 MRPS6P82932 125 aaKnown RBP16.72■□□□□ 0.27
SCARB2-210ENST00000638567 SLC9B1Q4ZJI4 515 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 GCNT7Q6ZNI0 430 aa16.72■□□□□ 0.27
SCARB2-210ENST00000638567 MOXD2PA6NHM9 499 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 KCNH1O95259 989 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 PGK1P00558 417 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 AMHP03971 560 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 CHI3L1P36222 383 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-210ENST00000638567 SPPL2CQ8IUH8 684 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 ADHFE1Q8IWW8 467 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 KBTBD2Q8IY47 623 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 STX19Q8N4C7 294 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 FAM126AQ9BYI3 521 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-210ENST00000638567 TXLNGYQ9BZA5 131 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 TMCC3Q9ULS5 477 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 ZNF142P52746 1687 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-210ENST00000638567 C22orf31O95567 290 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 IDO1P14902 403 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 IVDP26440 423 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 FBXO48Q5FWF7 155 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 ARMC12Q5T9G4 340 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 ARHGAP36Q6ZRI8 547 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 CROCCP3Q8IVE0 287 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 TMEM132CQ8N3T6 1108 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 OR4L1Q8NH43 312 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 GPR152Q8TDT2 470 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 C19orf60Q96EN9 201 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 TUBGCP5Q96RT8 1024 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 APOL4Q9BPW4 351 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 YJEFN3A6XGL0 299 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 RPL38P63173 70 aaKnown RBP16.71■□□□□ 0.27
SCARB2-210ENST00000638567 BROXQ5VW32 411 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 SATL1Q86VE3 508 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 SELENOMQ8WWX9 145 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 CRYGNQ8WXF5 182 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 HNRNPABQ99729 332 aaKnown RBP16.71■□□□□ 0.27
SCARB2-210ENST00000638567 C6orf62Q9GZU0 229 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-210ENST00000638567 FADS3Q9Y5Q0 445 aa16.71■□□□□ 0.27
SCARB2-210ENST00000638567 KLRG2A4D1S0 409 aaPredicted RBP16.71■□□□□ 0.26
SCARB2-210ENST00000638567 FAM159BA6NKW6 160 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 KPNA4O00629 521 aaPredicted RBP16.71■□□□□ 0.26
SCARB2-210ENST00000638567 RECQL5O94762 991 aaPredicted RBP16.71■□□□□ 0.26
SCARB2-210ENST00000638567 MT-ND1P03886 318 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 IRF9Q00978 393 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 CRY1Q16526 586 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 VPS26BQ4G0F5 336 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 ELMSAN1Q6PJG2 1045 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 TAS1R3Q7RTX0 852 aa16.71■□□□□ 0.26
SCARB2-210ENST00000638567 PLEKHG4BQ96PX9 1271 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms