RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CXADRP78310 365 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 INPP5AQ14642 412 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 ELOCQ15369 112 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 AFMIDQ63HM1 303 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 ESRP1Q6NXG1 681 aaKnown RBP18.61■□□□□ 0.57
CLN6-220ENST00000637450 LVRNQ6Q4G3 990 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 SRLQ86TD4 932 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 ZSWIM9Q86XI8 627 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 HID1Q8IV36 788 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 AOPEPQ8N6M6 819 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 WDR48Q8TAF3 677 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 TSACCQ96A04 125 aaPredicted RBP18.61■□□□□ 0.57
CLN6-220ENST00000637450 SLC46A1Q96NT5 459 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 APOOQ9BUR5 198 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 DHX35Q9H5Z1 703 aaKnown RBP18.61■□□□□ 0.57
CLN6-220ENST00000637450 THSD1Q9NS62 852 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 PCSK1NQ9UHG2 260 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 SATB2Q9UPW6 733 aa18.61■□□□□ 0.57
CLN6-220ENST00000637450 GCN1Q92616 2671 aaKnown RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 CFAP69A5D8W1 941 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 CASC3O15234 703 aaKnown RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 PALMO75781 387 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 PRB1P04280 392 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 HTR1BP28222 390 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 ANP32AP39687 249 aaKnown RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 NFATC4Q14934 902 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 ALG11Q2TAA5 492 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 C3orf38Q5JPI3 329 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 ENPP7Q6UWV6 458 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 ARHGAP12Q8IWW6 846 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 SDR16C5Q8N3Y7 309 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 TSEN2Q8NCE0 465 aaKnown RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 SCG3Q8WXD2 468 aaKnown RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 PRR11Q96HE9 360 aaPredicted RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 PEBP4Q96S96 227 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 KCTD15Q96SI1 283 aaPredicted RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 CCDC3Q9BQI4 270 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 SNRNP25Q9BV90 132 aaKnown RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 EDEM3Q9BZQ6 932 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
CLN6-220ENST00000637450 DOLKQ9UPQ8 538 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 ATP8A1Q9Y2Q0 1164 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 PCDHGA8Q9Y5G5 932 aa18.6■□□□□ 0.57
CLN6-220ENST00000637450 DAPK3O43293 454 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 ATMINO43313 823 aaPredicted RBP18.59■□□□□ 0.57
CLN6-220ENST00000637450 RASGRP1O95267 797 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 PRKCGP05129 697 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 ALPIP09923 528 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 CTSEP14091 401 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 ERCC2P18074 760 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 RBMS1P29558 406 aaKnown RBP18.59■□□□□ 0.57
CLN6-220ENST00000637450 SRP54P61011 504 aaKnown RBP18.59■□□□□ 0.57
CLN6-220ENST00000637450 TYRO3Q06418 890 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 NSUN2Q08J23 767 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLN6-220ENST00000637450 CCDC183Q5T5S1 534 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 CFAP58Q5T655 872 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 BROXQ5VW32 411 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 RFX8Q6ZV50 586 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 CYP4V2Q6ZWL3 525 aaPredicted RBP18.59■□□□□ 0.57
CLN6-220ENST00000637450 ARL10Q8N8L6 244 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 FNIP1Q8TF40 1166 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 KCNE4Q8WWG9 221 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 DPH1Q9BZG8 443 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 HAUS4Q9H6D7 363 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 ATP13A3Q9H7F0 1226 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 GULP1Q9UBP9 304 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 OR1A2Q9Y585 309 aa18.59■□□□□ 0.57
CLN6-220ENST00000637450 LRRC53A6NM62 1247 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 GOLGA6L22H0YM25 854 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 NTN3O00634 580 aaPredicted RBP18.58■□□□□ 0.56
CLN6-220ENST00000637450 C1QL1O75973 258 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 RNF8O76064 485 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 FTLP02792 175 aaPredicted RBP18.58■□□□□ 0.56
CLN6-220ENST00000637450 GZMAP12544 262 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 SERPINA4P29622 427 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 MIPP30301 263 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 HCAR3P49019 387 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 UCNP55089 124 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 C19orf57Q0VDD7 668 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 MTM1Q13496 603 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 RFTN1Q14699 578 aaPredicted RBP18.58■□□□□ 0.56
CLN6-220ENST00000637450 ARHGAP36Q6ZRI8 547 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 NYAP1Q6ZVC0 841 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 ZNF571Q7Z3V5 609 aaPredicted RBP18.58■□□□□ 0.56
CLN6-220ENST00000637450 RD3Q7Z3Z2 195 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 PSTKQ8IV42 348 aaKnown RBP18.58■□□□□ 0.56
CLN6-220ENST00000637450 ATL2Q8NHH9 583 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 PCDH19Q8TAB3 1148 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 ECHDC3Q96DC8 303 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 TRIM7Q9C029 511 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 AIPL1Q9NZN9 384 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 KLQ9UEF7 1012 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 SSUH2Q9Y2M2 353 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 RP1P56715 2156 aa18.58■□□□□ 0.56
CLN6-220ENST00000637450 PRPSAP2O60256 369 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 PCCBP05166 539 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 PDX1P52945 283 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 TMPRSS3P57727 454 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 POLR2LP62875 67 aaKnown RBP18.57■□□□□ 0.56
CLN6-220ENST00000637450 SKOR1P84550 965 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms