RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GLT6D1Q7Z4J2 308 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ULK2Q8IYT8 1036 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ADCY4Q8NFM4 1077 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 HASPINQ8TF76 798 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CYP4F11Q9HBI6 524 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 GMIPQ9P107 970 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PHF24Q9UPV7 400 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RWDD3Q9Y3V2 267 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 SLC38A8A6NNN8 435 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PSMD12O00232 456 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 FGFR3P22607 806 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 HECTD2Q5U5R9 776 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DHDDSQ86SQ9 333 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CASP10Q92851 521 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PPWD1Q96BP3 646 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PSKH2Q96QS6 385 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ADA2Q9NZK5 511 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MTF2Q9Y483 593 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 F5H423 210 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MAFKO60675 156 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TMCC1O94876 653 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ITGBL1O95965 494 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TFEBP19484 476 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 IMPDH1P20839 514 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 HMOX2P30519 316 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CLCN4P51793 760 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ATXN1P54253 815 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 FOXM1Q08050 763 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ARHGEF7Q14155 803 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DDR2Q16832 855 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 GPR33Q49SQ1 333 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF534Q76KX8 674 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DEFB107AQ8IZN7 70 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 FSTL5Q8N475 847 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KCTD4Q8WVF5 259 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CEP41Q9BYV8 373 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 SPG21Q9NZD8 308 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KIAA1522Q9P206 1035 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 SFMBT1Q9UHJ3 866 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 GNPTGQ9UJJ9 305 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 SLC25A13Q9UJS0 675 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 BAG5Q9UL15 447 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CCDC166P0CW27 439 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 FGF3P11487 239 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CYP2A6P11509 494 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CD9P21926 228 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DDX6P26196 483 aaKnown RBP eCLIP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MAGEA12P43365 314 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 BCL2L1Q07817 233 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TRAP1Q12931 704 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MPPE1Q53F39 396 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 COQ5Q5HYK3 327 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RASIP1Q5U651 963 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KRT80Q6KB66 452 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 EPGNQ6UW88 154 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PTAR1Q7Z6K3 402 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DDIASQ8IXT1 998 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MIER2Q8N344 545 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DCUN1D1Q96GG9 259 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 POMKQ9H5K3 350 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 NMRK1Q9NWW6 199 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 UBP1Q9NZI7 540 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 NUDT4Q9NZJ9 180 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CRLS1Q9UJA2 301 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MTMR11A4FU01 709 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 INSIG1O15503 277 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ALDOAP04075 364 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 HMBSP08397 361 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SNRPB2P08579 225 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CHRM3P20309 590 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SCNN1BP51168 640 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PCLAFQ15004 111 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CACHD1Q5VU97 1274 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 RBFAQ8N0V3 343 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FBXW8Q8N3Y1 598 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF461Q8TAF7 563 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SLC39A13Q96H72 371 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 OSBPL6Q9BZF3 934 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SPAG4Q9NPE6 437 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 MIOSQ9NXC5 875 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PKD2L2Q9NZM6 624 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TBC1D14Q9P2M4 693 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PSMD13Q9UNM6 376 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 EIF3FO00303 357 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 MATN2O00339 956 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 KDELR3O43731 214 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 KRT6AP02538 564 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 KRT6BP04259 564 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PKMP14618 531 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 AKT1P31749 480 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 KRT6CP48668 564 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TWF1Q12792 350 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TRIP10Q15642 601 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TMEM63BQ5T3F8 832 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FBXL22Q6P050 247 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CNKSR3Q6P9H4 555 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TUBGCP3Q96CW5 907 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 OSBPL1AQ9BXW6 950 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 DTNAQ9Y4J8 743 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms