RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 EYA2O00167 538 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 STX16O14662 325 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 MDM4O15151 490 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC16A5O15375 505 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 SPRY3O43610 288 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 LIASO43766 372 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 HBP1O60381 514 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 LMX1BO60663 402 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 KRT36O76013 467 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TMCC1O94876 653 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 IFNA2P01563 188 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TFRCP02786 760 aaKnown RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 LCKP06239 509 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CYP3A4P08684 503 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 WEE2P0C1S8 567 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM90A15PP0C7V4 464 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM90A14PP0C7W9 464 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TFPIP10646 304 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 HOXB9P17482 250 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CD72P21854 359 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 PRPH2P23942 346 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CYP3A7P24462 503 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ITGB8P26012 769 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TYK2P29597 1187 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 PGM1P36871 562 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 GRK6P43250 576 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 MAPK9P45984 424 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 RFX5P48382 616 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 NOVP48745 357 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 VEGFCP49767 419 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 PAPOLAP51003 745 aaKnown RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 RPS6KA3P51812 740 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CRIP2P52943 208 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 FOXL2P58012 376 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ACTR2P61160 394 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ABATP80404 500 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ARHGAP8P85298 464 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 POU3F1Q03052 451 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TRAF1Q13077 416 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 IL13RA2Q14627 380 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 NAA25Q14CX7 972 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ANKRD1Q15327 319 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ZRSR1Q15695 479 aaKnown RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 NFIL3Q16649 462 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 EDRF1Q3B7T1 1238 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TUBB8Q3ZCM7 444 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CTXN3Q4LDR2 81 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 C14orf177Q52M58 125 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 FNBP1LQ5T0N5 605 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TTC22Q5TAA0 569 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 STPG1Q5TH74 334 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ASPHD1Q5U4P2 390 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 OTUD1Q5VV17 481 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 DGAT2L7PQ6IED9 249 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 LIN54Q6MZP7 749 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CES5AQ6NT32 575 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 JMJD6Q6NYC1 403 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF474Q6S9Z5 364 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC22A25Q6T423 547 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 PARM1Q6UWI2 310 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC16A12Q6ZSM3 486 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 RASGRP2Q7LDG7 609 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 MDGA2Q7Z553 956 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 MYPOPQ86VE0 399 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 FJX1Q86VR8 437 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CHD1LQ86WJ1 897 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF354CQ86Y25 554 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 GPSM1Q86YR5 675 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 SCN4BQ8IWT1 228 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CADM3Q8N126 398 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 PAQR4Q8N4S7 273 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 AFAP1Q8N556 730 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC25A41Q8N5S1 370 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 PTGR2Q8N8N7 351 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 OR52N4Q8NGI2 321 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 RASSF8Q8NHQ8 419 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CEP76Q8TAP6 659 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM110DQ8TAY7 271 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 OTUD7AQ8TE49 926 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 MORC4Q8TE76 937 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 NOC3LQ8WTT2 800 aaKnown RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 FAR1Q8WVX9 515 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ZFPM2Q8WW38 1151 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TMED6Q8WW62 240 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 NCSTNQ92542 709 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 RSC1A1Q92681 617 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ATOH1Q92858 354 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TBC1D20Q96BZ9 403 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 IGSF21Q96ID5 467 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 GFM1Q96RP9 751 aaKnown RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 HERPUD2Q9BSE4 406 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 POLR3GLQ9BT43 218 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 GFRA4Q9GZZ7 299 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 LHPPQ9H008 270 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC32A1Q9H598 525 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 TASP1Q9H6P5 420 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 CATSPERBQ9H7T0 1116 aa1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 ACTR5Q9H9F9 607 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-209ENST00000635578 MAP6D1Q9H9H5 199 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms