RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MTF2Q9Y483 593 aaPredicted RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 TRPV2Q9Y5S1 764 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 SCN4AP35499 1836 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 HEATR9A2RTY3 570 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 CSPG5O95196 566 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 SPATA31D3P0C874 917 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 SQLEQ14534 574 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 NRF1Q16656 503 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.33□□□□□ -0.6
VARS2-213ENST00000625423 HECTD2Q5U5R9 776 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 CLEC6AQ6EIG7 209 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 KDELC1Q6UW63 502 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 LAYNQ6UX15 382 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 RBM44Q6ZP01 1051 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 KIAA0408Q6ZU52 694 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 SPATA31D4Q6ZUB0 917 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 AFAP1L2Q8N4X5 818 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 RTL3Q8N8U3 475 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 EME1Q96AY2 570 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 DGCR14Q96DF8 476 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 FAR2Q96K12 515 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 PRPF18Q99633 342 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 GRIP2Q9C0E4 1043 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 UNC93B1Q9H1C4 597 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 EPB41L1Q9H4G0 881 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 NT5MQ9NPB1 228 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 NMRK2Q9NPI5 230 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 NDUFA13Q9P0J0 144 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 AP4S1Q9Y587 144 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
VARS2-213ENST00000625423 MYADML2A6NDP7 307 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 TNFAIP8O95379 198 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CHRNA1P02708 482 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CAPNS1P04632 268 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 YWHAQP27348 245 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 GRIK1P39086 918 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 LEPRP48357 1165 aaKnown RBP11.32□□□□□ -0.6
VARS2-213ENST00000625423 MGAT5BQ3V5L5 792 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 NADK2Q4G0N4 442 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 AFMIDQ63HM1 303 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 SCD5Q86SK9 330 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 AHI1Q8N157 1196 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 LRTOMTQ8WZ04 291 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 LPGAT1Q92604 370 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CCDC126Q96EE4 140 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 PPP1R2P1Q96PQ5 205 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 KLHL5Q96PQ7 755 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 TRIM62Q9BVG3 475 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 SMOC2Q9H3U7 446 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 NMUR1Q9HB89 426 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 MYLKQ15746 1914 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CEP350Q5VT06 3117 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 ATP6AP2A0A1C7CYW4 349 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 PRORSD1PA6NEY8 169 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 F8W810 466 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 UBFD1O14562 309 aaKnown RBP11.32□□□□□ -0.6
VARS2-213ENST00000625423 TRPA1O75762 1119 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 ATP6AP2O75787 350 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CD86P42081 329 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 KCNC1P48547 511 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 SERPINH1P50454 418 aaKnown RBP11.32□□□□□ -0.6
VARS2-213ENST00000625423 CLCN5P51795 746 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 ARMC3Q5W041 872 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 OVOS1Q6IE37 1185 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CYP2R1Q6VVX0 501 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 BEND5Q7L4P6 421 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 OR9I1Q8NGQ6 314 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 OR13J1Q8NGT2 312 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 CALML6Q8TD86 181 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 SH3RF2Q8TEC5 729 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 SLC25A51Q9H1U9 297 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
VARS2-213ENST00000625423 ALG9Q9H6U8 611 aa11.32□□□□□ -0.6
VARS2-213ENST00000625423 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
VARS2-213ENST00000625423 SUCOQ9UBS9 1254 aaKnown RBP11.32□□□□□ -0.6
VARS2-213ENST00000625423 CCDC160A6NGH7 325 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 J3KR12 359 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 VILLO15195 856 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 PEX11BO96011 259 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 ITGB1P05556 798 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 RBP1P09455 135 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 FAM58BPP0C7Q3 252 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 ZNF26P17031 533 aaPredicted RBP11.31□□□□□ -0.6
VARS2-213ENST00000625423 FGFR3P22607 806 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 HSPA13P48723 471 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 PSMD5Q16401 504 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 TMEM207Q6UWW9 146 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 UBXN10Q96LJ8 280 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 MRPS26Q9BYN8 205 aaKnown RBP11.31□□□□□ -0.6
VARS2-213ENST00000625423 GSTO2Q9H4Y5 243 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 ZNF696Q9H7X3 374 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 FBRSL1Q9HCM7 1045 aaKnown RBP11.31□□□□□ -0.6
VARS2-213ENST00000625423 VWA7Q9Y334 891 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 TRAF6Q9Y4K3 522 aa11.31□□□□□ -0.6
VARS2-213ENST00000625423 A0A1W2PQH9 124 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms