RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 JAM2P57087 298 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 GEMIN4P57678 1058 aaKnown RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 RHOAP61586 193 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 CDR2Q01850 454 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 KCNC4Q03721 635 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 ZFP36L1Q07352 338 aaKnown RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 NFATC4Q14934 902 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 LRRC14Q15048 493 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 UGP2Q16851 508 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 INO80DQ53TQ3 878 aaPredicted RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 WDR59Q6PJI9 974 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 OGFOD3Q6PK18 319 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 LVRNQ6Q4G3 990 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 CAMK1DQ8IU85 385 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 FSTL5Q8N475 847 aaPredicted RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 RTL3Q8N8U3 475 aaKnown RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 Q8N9G6 341 aaPredicted RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 CCL4L1Q8NHW4 92 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 WDR48Q8TAF3 677 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 OR1E3Q8WZA6 343 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 EXTL1Q92935 676 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 NTAN1Q96AB6 310 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 ARHGEF26Q96DR7 871 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 PDXPQ96GD0 296 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 GFM1Q96RP9 751 aaKnown RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 RBM15Q96T37 977 aaKnown RBP eCLIP11.14□□□□□ -0.633e-7■□□□□ 10.7
DDX41-218ENST00000625286 LRRN3Q9H3W5 708 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 PDFQ9HBH1 243 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 MRPL40Q9NQ50 206 aaKnown RBP11.14□□□□□ -0.63
DDX41-218ENST00000625286 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 HPCAL4Q9UM19 191 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 SDK2Q58EX2 2172 aa11.14□□□□□ -0.63
DDX41-218ENST00000625286 NBASA2RRP1 2371 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 PRAMEF33A0A0G2JMD5 474 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 WASH4PA8MWX3 477 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 PRAMEF10O60809 474 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 RASGRP1O95267 797 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 FUCA1P04066 466 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 EPHB2P29323 1055 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 CCKBRP32239 447 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 LIG3P49916 1009 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 INHBCP55103 352 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 CYP4F2P78329 520 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 RALGDSQ12967 914 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 NFATC3Q12968 1075 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 AGERQ15109 404 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 ELOCQ15369 112 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 TPD52L1Q16890 204 aaPredicted RBP11.13□□□□□ -0.63
DDX41-218ENST00000625286 SLFN11Q7Z7L1 901 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 VASH2Q86V25 355 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 ZFAND4Q86XD8 727 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 UMODL1-AS1Q8N2C9 162 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 LGR4Q9BXB1 951 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 TRIM4Q9C037 500 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 SEMA6CQ9H3T2 930 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 SUV39H2Q9H5I1 410 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 LRRC19Q9H756 370 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 FGF22Q9HCT0 170 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 TAB2Q9NYJ8 693 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 PISDQ9UG56 409 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 APPL1Q9UKG1 709 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 FZD10Q9ULW2 581 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 DAAM1Q9Y4D1 1078 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 RNF215Q9Y6U7 377 aa11.13□□□□□ -0.63
DDX41-218ENST00000625286 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ZSCAN5CA6NGD5 496 aaPredicted RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 TMEM110-MUSTN1A8MSY1 372 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 C9orf172C9J069 976 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 NVLO15381 856 aaKnown RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 CCP110O43303 1012 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 B4GAT1O43505 415 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 IGSF6O95976 241 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 PCCBP05166 539 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ALPIP09923 528 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 FAM87AP0C7U9 286 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 KRT3P12035 628 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 CTSEP14091 401 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ERCC5P28715 1186 aaPredicted RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 MMP12P39900 470 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ARSDP51689 593 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 UBE2HP62256 183 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 RPL7AP62424 266 aaKnown RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 B4GALNT1Q00973 533 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 OGDHQ02218 1023 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 TCP11X2Q5H9J9 407 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ZNF574Q6ZN55 896 aaPredicted RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 PRICKLE2Q7Z3G6 844 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ZNF677Q86XU0 584 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 DTX1Q86Y01 620 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ZNF354CQ86Y25 554 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 JAMLQ86YT9 394 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 CCNJLQ8IV13 435 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 SLITRK4Q8IW52 837 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 HCAR2Q8TDS4 363 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 HTR3CQ8WXA8 447 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 CASKIN2Q8WXE0 1202 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 C1QTNF7Q9BXJ2 289 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 TMEM168Q9H0V1 697 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms