RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ZNF354CQ86Y25 554 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 GATAD2AQ86YP4 633 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 P3H4Q92791 437 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 ANKRD36A6QL64 1941 aa20.19■□□□□ 0.82
R3HCC1-210ENST00000625275 SRRM3A6NNA2 597 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 KDELR3O43731 214 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 PRNPP04156 253 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 TUBB4AP04350 444 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 GARSP41250 739 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ARRB1P49407 418 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 SERPINH1P50454 418 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ARF5P84085 180 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 CCDC15Q0P6D6 951 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 RETSATQ6NUM9 610 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 IQCHQ86VS3 1027 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 OXR1Q8N573 874 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ATPAF2Q8N5M1 289 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 CHST14Q8NCH0 376 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 TMIEQ8NEW7 156 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ACTL9Q8TC94 416 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 LRRN4Q8WUT4 740 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ARRDC3Q96B67 414 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 TNKS2Q9H2K2 1166 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ERVMER34-1Q9H9K5 563 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 DYRK4Q9NR20 520 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 TTC7AQ9ULT0 858 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 HPCAL4Q9UM19 191 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ADAMTS20P59510 1910 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 LRRK1Q38SD2 2015 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 DSPP15924 2871 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 ESPNB1AK53 854 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 J3KR12 359 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 MX2P20592 715 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 EPHA8P29322 1005 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 RECQLP46063 649 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 OTUD4Q01804 1114 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 TMPRSS7Q7RTY8 843 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 GRIN3AQ8TCU5 1115 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 SAP25Q8TEE9 199 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 FAM118BQ9BPY3 351 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 CEP44Q9C0F1 390 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 PDFQ9HBH1 243 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 SMARCAL1Q9NZC9 954 aa20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 IPO11Q9UI26 975 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 R3HDM2Q9Y2K5 976 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-210ENST00000625275 WDFY3Q8IZQ1 3526 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 PRAMEF26H0Y7S4 382 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 MAFKO60675 156 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 MAGEC1O60732 1142 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 PRAMEF11O60813 436 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 RNGTTO60942 597 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 ITGAVP06756 1048 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 SLC20A2Q08357 652 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 OVGP1Q12889 678 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 NOMO1Q15155 1222 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 SIX1Q15475 284 aaPredicted RBP20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 LONRF2Q1L5Z9 754 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 LEKR1Q6ZMV7 388 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 DPY19L3Q6ZPD9 716 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 SPATS2Q86XZ4 545 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 ACTRT1Q8TDG2 376 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 ZNF592Q92610 1267 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 HDAC11Q96DB2 347 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 LGMNQ99538 433 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 SP110Q9HB58 689 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 IL36AQ9UHA7 158 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 ACTL7AQ9Y615 435 aa20.17■□□□□ 0.82
R3HCC1-210ENST00000625275 PGRMC1O00264 195 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 ZNF500O60304 480 aaPredicted RBP20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 CD160O95971 181 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 CAPNS1P04632 268 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 PPIDQ08752 370 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 STAT4Q14765 748 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 PDK1Q15118 436 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 CCDC157Q569K6 752 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 NEK5Q6P3R8 708 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 BZW1Q7L1Q6 419 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 ZC3H18Q86VM9 953 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 CREG2Q8IUH2 290 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 LRRC49Q8IUZ0 686 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 GALNT15Q8N3T1 639 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 PCDH20Q8N6Y1 951 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 TTC13Q8NBP0 860 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 PPP1R16AQ96I34 528 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 CAPZA3Q96KX2 299 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 WASF2Q9Y6W5 498 aa20.16■□□□□ 0.82
R3HCC1-210ENST00000625275 URB1O60287 2271 aaKnown RBP20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 A0A1W2PQU0 124 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 ZSCAN5CA6NGD5 496 aaPredicted RBP20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 RNF103O00237 685 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 PPP1R12AO14974 1030 aaPredicted RBP20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 ZNF821O75541 412 aaPredicted RBP20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 RXRGP48443 463 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 IL10RBQ08334 325 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 ARSIQ5FYB1 569 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 B4GALNT4Q76KP1 1039 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 ERN2Q76MJ5 926 aaKnown RBP20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 PROSER1Q86XN7 944 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 CCNYQ8ND76 341 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 ATG4AQ8WYN0 398 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms