RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TRIB3Q96RU7 358 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 KLF16Q9BXK1 252 aaPredicted RBP19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 C1orf21Q9H246 121 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 EBF2Q9HAK2 575 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 IGSF5Q9NSI5 407 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 AGO1Q9UL18 857 aaKnown RBP19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 RIMKLBQ9ULI2 386 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 ATP11BQ9Y2G3 1177 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 ACTL7AQ9Y615 435 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 NDST3O95803 873 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 S1PR4O95977 384 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 PPP3CCP48454 512 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 SGSHP51688 502 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 ZNF177Q13360 481 aaPredicted RBP19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 PLD1Q13393 1074 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 GALNT3Q14435 633 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 TAF12Q16514 161 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 FAM83EQ2M2I3 478 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 ARL13AQ5H913 290 aaPredicted RBP19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 TTC8Q8TAM2 541 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 BLOC1S5Q8TDH9 187 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 ZNF689Q96CS4 500 aaPredicted RBP19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 TMEM169Q96HH4 297 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 HERC2P3Q9BVR0 1158 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 CINPQ9BW66 212 aaPredicted RBP19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 NOP53Q9NZM5 478 aaKnown RBP19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 VWA7Q9Y334 891 aa19.82■□□□□ 0.76
PCDHB11-202ENST00000624887 A0A1B0GVM2 712 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 TCAF2A6NFQ2 919 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 MATN2O00339 956 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 CCL22O00626 93 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 MAGEC1O60732 1142 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 RHOCP08134 193 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 MPSTP25325 297 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 RPL14P50914 215 aaKnown RBP19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 ILF2Q12905 390 aaKnown RBP19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 VEPH1Q14D04 833 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 HECTD2Q5U5R9 776 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 TMC7Q7Z402 723 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 FBXO27Q8NI29 283 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 MAPK15Q8TD08 544 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 MOCOSQ96EN8 888 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 TBATAQ96M53 351 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 MARCH4Q9P2E8 410 aaPredicted RBP19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 TBC1D30Q9Y2I9 924 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 ARL5AQ9Y689 179 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 ANAPC1Q9H1A4 1944 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 C2orf78A6NCI8 922 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 ENTPD5O75356 428 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 PIGNO95427 931 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 GLDCP23378 1020 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 PGM1P36871 562 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 PRKAA1Q13131 559 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 RAB33AQ14088 237 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 CSHL1Q14406 222 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 DNAL1Q4LDG9 190 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 SLC9B1Q4ZJI4 515 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 AGAP9Q5VTM2 703 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 METTL21CQ5VZV1 264 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 ENDOVQ8N8Q3 282 aaKnown RBP19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 GPR150Q8NGU9 434 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 PDCD6IPQ8WUM4 868 aaKnown RBP19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 SCG3Q8WXD2 468 aaKnown RBP19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 NUDCD1Q96RS6 583 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 TMEM39AQ9NV64 488 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 PLA2G4CQ9UP65 541 aa19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.81■□□□□ 0.76
PCDHB11-202ENST00000624887 OR51F1A6NGY5 319 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 HDAC3O15379 428 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 ANP32DO95626 131 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 LTA4HP09960 611 aaKnown RBP19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 CR2P20023 1033 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 ATP5F1P24539 256 aaPredicted RBP19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 RGRP47804 291 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 RAP1GDS1P52306 607 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 DNAJB13P59910 316 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 TECRLQ5HYJ1 363 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 DNAJC1Q96KC8 554 aaKnown RBP19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 UBXN10Q96LJ8 280 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 DDX50Q9BQ39 737 aaKnown RBP19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 UNKQ9C0B0 810 aaKnown RBP19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 C11orf49Q9H6J7 331 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 GPAMQ9HCL2 828 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 NKX1-2Q9UD57 310 aaPredicted RBP19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 LTBP2Q14767 1821 aa19.8■□□□□ 0.76
PCDHB11-202ENST00000624887 INSIG1O15503 277 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 NPHS1O60500 1241 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 RPP40O75818 363 aaKnown RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 GLP2RO95838 553 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 GOT2P00505 430 aaKnown RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 LMNAP02545 664 aaKnown RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 IRF1P10914 325 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 TFEBP19484 476 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 CCR10P46092 362 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 LBX1P52954 281 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 LDB1Q86U70 411 aaPredicted RBP19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 LSMEM2Q8N112 164 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 PNPLA1Q8N8W4 532 aa19.79■□□□□ 0.76
PCDHB11-202ENST00000624887 TXNDC5Q8NBS9 432 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms