RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 MUSKO15146 869 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 CFLARO15519 480 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 NPHS1O60500 1241 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 RAG1P15918 1043 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 KCNC1P48547 511 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 GATMP50440 423 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 CDKN2DP55273 166 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 PRAMEP78395 509 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 TRIP4Q15650 581 aaPredicted RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 MAP3K21Q5TCX8 1036 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 RNF180Q86T96 592 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 PIM3Q86V86 326 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 CFAP52Q8N1V2 620 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 TEX26Q8N6G2 289 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 RANBP9Q96S59 729 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 SEMA3CQ99985 751 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 PPP1R12CQ9BZL4 782 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 CCSER2Q9H7U1 834 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 ZBTB26Q9HCK0 441 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 ABT1Q9ULW3 272 aaKnown RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 ACTL7AQ9Y615 435 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 MROH6A6NGR9 719 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 SDHDO14521 159 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 LDB2O43679 373 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 IPO13O94829 963 aaKnown RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 S1PR4O95977 384 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 LTA4HP09960 611 aaKnown RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 ATXN1LP0C7T5 689 aaKnown RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 PIRTP0C851 137 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 PBX3P40426 434 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 CLCN5P51795 746 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 SULT2A1Q06520 285 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 GPR158Q5T848 1215 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 AGAP9Q5VTM2 703 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 ADGRG6Q86SQ4 1221 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 KBTBD6Q86V97 674 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 JADE3Q92613 823 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 GATA6Q92908 595 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 USP13Q92995 863 aaPredicted RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 UBXN10Q96LJ8 280 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 TBATAQ96M53 351 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 GLT1D1Q96MS3 346 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 CCDC28BQ9BUN5 200 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 IL37Q9NZH6 218 aa12.04□□□□□ -0.48
TP53-227ENST00000622645 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.04□□□□□ -0.48
TP53-227ENST00000622645 FAM92AA1XBS5 289 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 NT5C1B-RDH14C9J2C7 533 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 STX16-NPEPL1H3BU86 382 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 UBTFL6P0CB48 400 aaPredicted RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 ENO3P13929 434 aaPredicted RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 TSPAN8P19075 237 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 PEX2P28328 305 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 MAGEA11P43364 429 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 CCNHP51946 323 aaPredicted RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 KPNA2P52292 529 aaKnown RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 THOP1P52888 689 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 PKNOX1P55347 436 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 DNAJB13P59910 316 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 PFKPQ01813 784 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 SERINC3Q13530 473 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 NADSYN1Q6IA69 706 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 BLOC1S5Q8TDH9 187 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 DDX50Q9BQ39 737 aaKnown RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 TLR8Q9NR97 1041 aaKnown RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 ARL5AQ9Y689 179 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 LOC285095A0A1B0GVY8 99 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 DRGXA6NNA5 263 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 H3BNX3 289 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 SYN3O14994 580 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 SLC7A4O43246 635 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 PAPSS2O95340 614 aaPredicted RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 SLC4A1P02730 911 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 SP100P23497 879 aaPredicted RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 DPP6P42658 865 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 KCNQ1P51787 676 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 C1QTNF8P60827 252 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 MRPL58Q14197 206 aaKnown RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 GALNT3Q14435 633 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 GIPC2Q8TF65 315 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 FATE1Q969F0 183 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 MAELQ96JY0 434 aaKnown RBP12.03□□□□□ -0.48
TP53-227ENST00000622645 NPAS2Q99743 824 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 EBF3Q9H4W6 596 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 ALG9Q9H6U8 611 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
TP53-227ENST00000622645 DOCK4Q8N1I0 1966 aa12.02□□□□□ -0.48
TP53-227ENST00000622645 A0A0D9SEW6 157 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 MTMR11A4FU01 709 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 VNN2O95498 520 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 XRCC1P18887 633 aaPredicted RBP12.02□□□□□ -0.49
TP53-227ENST00000622645 PEX19P40855 299 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 ATXN3P54252 364 aaPredicted RBP12.02□□□□□ -0.49
TP53-227ENST00000622645 IL10RBQ08334 325 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 DUSP4Q13115 394 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms