RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 FAM187BQ17R55 369 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 PLA2G4EQ3MJ16 856 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ZACNQ401N2 412 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 PARP15Q460N3 678 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ZNF662Q6ZS27 426 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SH3RF1Q7Z6J0 888 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ARL14EPQ8N8R7 260 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 TTC29Q8NA56 475 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ASZ1Q8WWH4 475 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 FBXO6Q9NRD1 293 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 DUX4Q9UBX2 424 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SLIT3O75094 1523 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 DDX3XO00571 662 aaKnown RBP eCLIP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SLC31A1O15431 190 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 FKBP6O75344 327 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 GOT1P17174 413 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 RPL17P18621 184 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SRSF11Q05519 484 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 LEMD2Q8NC56 503 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SEMA4DQ92854 862 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 KAT5Q92993 513 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 CATSPER2Q96P56 530 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 DUSP9Q99956 384 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 HSD17B14Q9BPX1 270 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 GTPBP2Q9BX10 602 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ROGDIQ9GZN7 287 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ALKBH4Q9NXW9 302 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 MKL2Q9ULH7 1088 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 DUSP12Q9UNI6 340 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 PCDHGC5Q9Y5F6 944 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 LRP6O75581 1613 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 A0A0U1RQJ8 604 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 RGS5O15539 181 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ADRA1DP25100 572 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SLC1A6P48664 564 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 TRMT5Q32P41 509 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 UAP1L1Q3KQV9 507 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 TCEAL5Q5H9L2 206 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 IZUMO2Q6UXV1 221 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 TMEM26Q6ZUK4 368 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 CHSY3Q70JA7 882 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ANKS1BQ7Z6G8 1248 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 RNASE11Q8TAA1 199 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 TRMT61BQ9BVS5 477 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 SLITRK2Q9H156 845 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 TBC1D30Q9Y2I9 924 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ULK1O75385 1050 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 FGRP09769 529 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 MC4RP32245 332 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 GPAT3Q53EU6 434 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 LRRC38Q5VT99 294 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ACTRT2Q8TDY3 377 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 STK32AQ8WU08 396 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 HMGB4Q8WW32 186 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 RNF157Q96PX1 679 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ACBD6Q9BR61 282 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 NR2E1Q9Y466 385 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 ASB3Q9Y575 518 aa9.84□□□□□ -0.83
CLTCL1-211ENST00000621271 MDM4O15151 490 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TSPAN1O60635 241 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 CCDC166P0CW27 439 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TACR2P21452 398 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ITPKBP27987 946 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 GDI1P31150 447 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 NAA20P61599 178 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ATP13A5Q4VNC0 1218 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 R3HCC1LQ7Z5L2 792 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC9A9Q8IVB4 645 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 KIAA2013Q8IYS2 634 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 GPR156Q8NFN8 814 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 AP2M1Q96CW1 435 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 EVLQ9UI08 416 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 PEX10O60683 326 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 NTRK1P04629 796 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 PFKMP08237 780 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 CXCR3P49682 368 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 CASP5P51878 434 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 IFI35P80217 286 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC34A1Q06495 639 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 FASTKQ14296 549 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 CCL14Q16627 93 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 PRSS55Q6UWB4 352 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 HID1Q8IV36 788 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 RNFT2Q96EX2 444 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 LMAN2LQ9H0V9 348 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 KCTD5Q9NXV2 234 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TAGLN3Q9UI15 199 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 IFT172Q9UG01 1749 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 C15orf38-AP3S2A0A0A6YYH1 394 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 B4GALT4O60513 344 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 BMP6P22004 513 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SSTR1P30872 391 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 MAT2AP31153 395 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SSR2P43308 183 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SUZ12Q15022 739 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC25A52Q3SY17 297 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 MINDY4Q4G0A6 757 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 C2orf27AQ580R0 203 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 CAPN13Q6MZZ7 669 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms