RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	GDPD5	Q8WTR4	605 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	IGSF8	Q969P0	613 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	HDAC10	Q969S8	669 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	FAM193B	Q96PV7	902 aa	Predicted RBP	13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	RTKN	Q9BST9	563 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TRIM62	Q9BVG3	475 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	VCX	Q9H320	206 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	UXT	Q9UBK9	157 aa	Predicted RBP	13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ACTL7A	Q9Y615	435 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	RGSL1	A5PLK6	1076 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	NT5C1B-RDH14	C9J2C7	533 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	LIN7A	O14910	233 aa	Predicted RBP	13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	SERPINH1	P50454	418 aa	Known RBP	13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ARSD	P51689	593 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PRAME	P78395	509 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ART3	Q13508	389 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	SFT2D3	Q587I9	215 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	C10orf120	Q5SQS8	335 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PIM3	Q86V86	326 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	KY	Q8NBH2	561 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	BLOC1S5	Q8TDH9	187 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	RPRD1A	Q96P16	312 aa	Predicted RBP	13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	SEPT5	Q99719	369 aa	Predicted RBP	13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TNFRSF12A	Q9NP84	129 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	IGSF5	Q9NSI5	407 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TREX1	Q9NSU2	369 aa		13.98	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ATP6AP2	A0A1C7CYW4	349 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ADAMTS4	O75173	837 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ATP6AP2	O75787	350 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PRKAR2A	P13861	404 aa	Known RBP	13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	RENBP	P51606	427 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	CLLU1OS	Q5K130	101 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	KLHDC9	Q8NEP7	349 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ANKRD49	Q8WVL7	239 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	NCKIPSD	Q9NZQ3	722 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	HCST	Q9UBK5	93 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	DOCK4	Q8N1I0	1966 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TARM1	B6A8C7	271 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	HDC	P19113	662 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	CRABP2	P29373	138 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ACVRL1	P37023	503 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PPARG	P37231	505 aa	Predicted RBP	13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	THOP1	P52888	689 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	AQP4	P55087	323 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MRPS22	P82650	360 aa	Known RBP	13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	GALNT3	Q14435	633 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MGAT5B	Q3V5L5	792 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	CTXN3	Q4LDR2	81 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	GPR158	Q5T848	1215 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	FAM171A1	Q5VUB5	890 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	GK5	Q6ZS86	529 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MON1A	Q86VX9	555 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	RDH11	Q8TC12	318 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MIPOL1	Q8TD10	442 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ZYG11B	Q9C0D3	744 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ALG9	Q9H6U8	611 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TBC1D13	Q9NVG8	400 aa		13.97	□□□□□ -0.17
CACNA1C-231	ENST00000616390	SLC12A8	A0AV02	714 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	SMIM24	O75264	130 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	DNAJB2	P25686	324 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MTTP	P55157	894 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	CAP1	Q01518	475 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ZNF33A	Q06730	810 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PPP1R3A	Q16821	1122 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ARTN	Q5T4W7	220 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	METTL21C	Q5VZV1	264 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	FBXL22	Q6P050	247 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PCDH20	Q8N6Y1	951 aa	Known RBP	13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	OR52K2	Q8NGK3	314 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	GIPC2	Q8TF65	315 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	FBXO32	Q969P5	355 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MYEOV	Q96EZ4	313 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	SLC25A51	Q9H1U9	297 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PCDHB8	Q9UN66	801 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	COPG1	Q9Y678	874 aa	Known RBP	13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	HEATR9	A2RTY3	570 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	XRCC1	P18887	633 aa	Predicted RBP	13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	OR1E1	P30953	314 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	HOXC13	P31276	330 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	GATM	P50440	423 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	FAM83E	Q2M2I3	478 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	FBXO48	Q5FWF7	155 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	VARS2	Q5ST30	1063 aa	Known RBP	13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	CLEC6A	Q6EIG7	209 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	KDELC1	Q6UW63	502 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	CNTN4	Q8IWV2	1026 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	KDM1B	Q8NB78	822 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TBATA	Q96M53	351 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TUBGCP5	Q96RT8	1024 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	MRPL57	Q9BQC6	102 aa	Known RBP	13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	PIDD1	Q9HB75	910 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	KLF15	Q9UIH9	416 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TLR6	Q9Y2C9	796 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	ARL5A	Q9Y689	179 aa		13.96	□□□□□ -0.17
CACNA1C-231	ENST00000616390	TRPA1	O75762	1119 aa		13.96	□□□□□ -0.18
CACNA1C-231	ENST00000616390	FCGRT	P55899	365 aa		13.96	□□□□□ -0.18
CACNA1C-231	ENST00000616390	TAF10	Q12962	218 aa		13.96	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms