RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 KCNN4O15554 427 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 CPP00450 1065 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 FAM193AP78312 1265 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 SEMG2Q02383 582 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 ELP6Q0PNE2 266 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 SF3A2Q15428 464 aaKnown RBP16.72■□□□□ 0.27
IRF1-211ENST00000613424 TMEM259Q4ZIN3 620 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 TRIM61Q5EBN2 209 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 ERAP2Q6P179 960 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 SLC23A3Q6PIS1 610 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 RABEPKQ7Z6M1 372 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 SPATA22Q8NHS9 363 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 CXorf40AQ8TE69 158 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 PIH1D2Q8WWB5 315 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 ATG4AQ8WYN0 398 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 TADA1Q96BN2 335 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 PBKQ96KB5 322 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 TDRD1Q9BXT4 1180 aaKnown RBP16.72■□□□□ 0.27
IRF1-211ENST00000613424 SLC17A9Q9BYT1 436 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 TM9SF3Q9HD45 589 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 KCND1Q9NSA2 647 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 DNPEPQ9ULA0 475 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 CHKBQ9Y259 395 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 TRPM6Q9BX84 2022 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 PRR5-ARHGAP8B1AHC4 643 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 WNT9AO14904 365 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 KHNYNO15037 678 aaKnown RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 SLC31A1O15431 190 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 MMP20O60882 483 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 PAK4O96013 591 aaPredicted RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 MT-CYBP00156 380 aaPredicted RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 PRLP01236 227 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 FGGP02679 453 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 PRLRP16471 622 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 NFKB1P19838 968 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 NUDT1P36639 197 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 MMP12P39900 470 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 GNG11P61952 73 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 IRX4P78413 519 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 FGL2Q14314 439 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 SIX1Q15475 284 aaPredicted RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 SETMARQ53H47 684 aaPredicted RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 TCEAL6Q6IPX3 200 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 GPR161Q8N6U8 529 aaKnown RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 C1orf54Q8WWF1 131 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 TCEAL3Q969E4 200 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 SERAC1Q96JX3 654 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 FCRL5Q96RD9 977 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 WRAP53Q9BUR4 548 aaKnown RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 C1QTNF2Q9BXJ5 285 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 FRMD8P1Q9BZ68 369 aaPredicted RBP16.71■□□□□ 0.27
IRF1-211ENST00000613424 PCDH9Q9HC56 1237 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 SLC6A14Q9UN76 642 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 DMTF1Q9Y222 760 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 PPIL1Q9Y3C6 166 aa16.71■□□□□ 0.27
IRF1-211ENST00000613424 PI4KAP42356 2102 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 A8MX80 341 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 LIASO43766 372 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 ZNF189O75820 626 aaPredicted RBP16.7■□□□□ 0.26
IRF1-211ENST00000613424 CFIP05156 583 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 CA4P22748 312 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 RACK1P63244 317 aaKnown RBP16.7■□□□□ 0.26
IRF1-211ENST00000613424 SGCGQ13326 291 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 PTPRRQ15256 657 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 LONRF2Q1L5Z9 754 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 ANKRD20A2Q5SQ80 823 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 ANKRD20A1Q5TYW2 823 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 ANKRD20A3Q5VUR7 823 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 PRR23CQ6ZRP0 262 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 DPPA4Q7L190 304 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 ZSCAN30Q86W11 494 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 C17orf53Q8N3J3 647 aaPredicted RBP16.7■□□□□ 0.26
IRF1-211ENST00000613424 RASGEF1CQ8N431 466 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 FAM71DQ8N9W8 422 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 MAIP1Q8WWC4 291 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 SCRN2Q96FV2 425 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 SLC6A18Q96N87 628 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 TMEM121Q9BTD3 319 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 NUSAP1Q9BXS6 441 aaKnown RBP16.7■□□□□ 0.26
IRF1-211ENST00000613424 CAPN10Q9HC96 672 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 UBP1Q9NZI7 540 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 B4GALT6Q9UBX8 382 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 LAMA1P25391 3075 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 FAM186AA6NE01 2351 aa16.7■□□□□ 0.26
IRF1-211ENST00000613424 PLXNA2O75051 1894 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 C5orf60A6NFR6 353 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 F5H423 210 aaPredicted RBP16.69■□□□□ 0.26
IRF1-211ENST00000613424 PRAMEF26H0Y7S4 382 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 TM7SF2O76062 418 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 STK10O94804 968 aaKnown RBP16.69■□□□□ 0.26
IRF1-211ENST00000613424 CTPS1P17812 591 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 CSNK1EP49674 416 aaKnown RBP16.69■□□□□ 0.26
IRF1-211ENST00000613424 LIG3P49916 1009 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 AFF3P51826 1226 aaKnown RBP16.69■□□□□ 0.26
IRF1-211ENST00000613424 EPHB1P54762 984 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 RPL26P61254 145 aaKnown RBP16.69■□□□□ 0.26
IRF1-211ENST00000613424 RALGDSQ12967 914 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 SNX1Q13596 522 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 SLC14A2Q15849 920 aa16.69■□□□□ 0.26
IRF1-211ENST00000613424 NAPEPLDQ6IQ20 393 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms